RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 APOC2P02655 101 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 HEXBP07686 556 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 CD99P14209 185 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 ART1P52961 327 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 EMP3P54852 163 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 CSE1LP55060 971 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 TCEAL1Q15170 157 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 BBS12Q6ZW61 710 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 DCUN1D3Q8IWE4 304 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 KATNAL2Q8IYT4 538 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 CPAMD8Q8IZJ3 1885 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 OR4N4Q8N0Y3 316 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 CFAP61Q8NHU2 1237 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 PHF10Q8WUB8 498 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 STYXQ8WUJ0 223 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 LRRC45Q96CN5 670 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 IMMP1LQ96LU5 166 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 YIPF2Q9BWQ6 316 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 C14orf105Q9NVL8 296 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 STOX2Q9P2F5 926 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 IMPACTQ9P2X3 320 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 TRPC4Q9UBN4 977 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 CIDEBQ9UHD4 219 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 SLC39A10Q9ULF5 831 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 KLK4Q9Y5K2 254 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 SPG11Q96JI7 2443 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ABCA2Q9BZC7 2435 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 FAM227AF5H4B4 570 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 F8W8V4 182 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 TTI1O43156 1089 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 PRPF4O43172 522 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 STK10O94804 968 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 EIF2S1P05198 315 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 TPH1P17752 444 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 PSMA3P25788 255 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 CCR7P32248 378 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ALDH6A1Q02252 535 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 HSPA14Q0VDF9 509 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 DSG2Q14126 1118 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 PCOLCEQ15113 449 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 FBXO42Q6P3S6 717 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 TMEM205Q6UW68 189 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 UNC5DQ6UXZ4 953 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 NEK10Q6ZWH5 1172 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 VRK3Q8IV63 474 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 CCDC50Q8IVM0 306 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 KLHDC8BQ8IXV7 354 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 CA5BP1Q8WTZ4 195 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ASZ1Q8WWH4 475 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 MVB12AQ96EY5 273 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 C10orf90Q96M02 699 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 MIPEPQ99797 713 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 TUBB6Q9BUF5 446 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 RAB11FIP5Q9BXF6 653 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 HEMGNQ9BXL5 484 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 TGIF2Q9GZN2 237 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 RBSNQ9H1K0 784 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ALG6Q9Y672 507 aa11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 ANKHD1Q8IWZ3 2542 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-209ENST00000539982 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 FAM221AA4D161 298 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 MROH6A6NGR9 719 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 A8MUI8 341 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 E9PLN8 166 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 FFAR3O14843 346 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 GPR42O15529 346 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 ASNA1O43681 348 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 OR1I1O60431 355 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 GPC4O75487 556 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 SLC26A3P40879 764 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 POU6F1Q14863 301 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 PRTGQ2VWP7 1150 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 TTC23LQ6PF05 361 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 NCCRP1Q6ZVX7 275 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 DOLPP1Q86YN1 238 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 CDKL3Q8IVW4 592 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 AMER2Q8N7J2 671 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 OR2L3Q8NG85 312 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 AGAP11Q8TF27 550 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 CABS1Q96KC9 395 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 ZNF354BQ96LW1 612 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 SPATA13Q96N96 652 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 TTC1Q99614 292 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 VKORC1Q9BQB6 163 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 MKKSQ9NPJ1 570 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
CLSTN3-209ENST00000539982 CCDC162PA2VCL2 907 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 ASPDHA6ND91 283 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 RCCD1A6NED2 376 aa11.02□□□□□ -0.65
CLSTN3-209ENST00000539982 OR51F1A6NGY5 319 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms