RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 INPP5DQ92835 1189 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 MIB2Q96AX9 1013 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 PTERQ96BW5 349 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 GPR21Q99679 349 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 EBNA1BP2Q99848 306 aaKnown RBP16.05■□□□□ 0.16
DDB1-215ENST00000539712 DPH7Q9BTV6 452 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 ACAT2Q9BWD1 397 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 CUTCQ9NTM9 273 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 PLAAQ9Y263 795 aa16.05■□□□□ 0.16
DDB1-215ENST00000539712 HEATR5BQ9P2D3 2071 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 A6NL46 340 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 E7ENX8 843 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 ERVK-10P10266 1014 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 PGAM1P18669 254 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 FOLR3P41439 243 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 MLLT10P55197 1068 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 VSX2P58304 361 aaPredicted RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 TAP2Q03519 686 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 NADK2Q4G0N4 442 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 YOD1Q5VVQ6 348 aaPredicted RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 RAB43Q86YS6 212 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 C2CD4AQ8NCU7 369 aaPredicted RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 FKBP10Q96AY3 582 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 PWWP2AQ96N64 755 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 SPSB2Q99619 263 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 WDR83Q9BRX9 315 aaKnown RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 AARSD1Q9BTE6 412 aaKnown RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 SLC26A1Q9H2B4 701 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 IARS2Q9NSE4 1012 aaKnown RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 STOX2Q9P2F5 926 aaPredicted RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 NDOR1Q9UHB4 597 aa16.04■□□□□ 0.16
DDB1-215ENST00000539712 GPN3Q9UHW5 284 aaPredicted RBP16.04■□□□□ 0.16
DDB1-215ENST00000539712 A0A0J9YVX5 310 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CATP04040 527 aaKnown RBP16.03■□□□□ 0.16
DDB1-215ENST00000539712 CD63P08962 238 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 MPC1LP0DKB6 136 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 SKIV2L2P42285 1042 aaKnown RBP16.03■□□□□ 0.16
DDB1-215ENST00000539712 OR1D4P47884 311 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CD97P48960 835 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PNLIPRP1P54315 467 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PRDX1Q06830 199 aaKnown RBP16.03■□□□□ 0.16
DDB1-215ENST00000539712 NKG7Q16617 165 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PRTGQ2VWP7 1150 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 TTLL9Q3SXZ7 439 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 DCAF10Q5QP82 559 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 ZNF425Q6IV72 752 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PIWIL4Q7Z3Z4 852 aaKnown RBP16.03■□□□□ 0.16
DDB1-215ENST00000539712 KCNMB4Q86W47 210 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CNTN4Q8IWV2 1026 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CPNE9Q8IYJ1 553 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 ARHGEF39Q8N4T4 335 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PPFIBP2Q8ND30 876 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CALML6Q8TD86 181 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 IP6K3Q96PC2 410 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 SMAD5Q99717 465 aaKnown RBP16.03■□□□□ 0.16
DDB1-215ENST00000539712 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 WDR54Q9H977 334 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 FAM114A2Q9NRY5 505 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 P4HTMQ9NXG6 502 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 CTSFQ9UBX1 484 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 ASIC3Q9UHC3 531 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 PCDHGB7Q9Y5F8 929 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 COMMD10Q9Y6G5 202 aa16.03■□□□□ 0.16
DDB1-215ENST00000539712 USP9YO00507 2555 aaPredicted RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 HYKKA2RU49 373 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 CLEC18AA5D8T8 446 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 VSTM2BA6NLU5 285 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 H0YGG7 62 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 SORBS2O94875 1100 aaKnown RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 AHSGP02765 367 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ALBP02768 609 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ENO3P13929 434 aaPredicted RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 CMPK1P30085 196 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 HSD17B2P37059 387 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 RRADP55042 308 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ARF3P61204 181 aaPredicted RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 GNG11P61952 73 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 SRSF1Q07955 248 aaKnown RBP eCLIP16.02■□□□□ 0.16
DDB1-215ENST00000539712 ICE2Q659A1 982 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 CLEC18BQ6UXF7 455 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 METTL27Q8N6F8 245 aaPredicted RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 RBMXL3Q8N7X1 1067 aaKnown RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 Q8NA96 180 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 CLEC18CQ8NCF0 446 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 C10orf90Q96M02 699 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 OR2A5Q96R48 311 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 NDNQ99608 321 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ZFYVE21Q9BQ24 234 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 FAM167BQ9BTA0 163 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 CCDC68Q9H2F9 335 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 SLC17A6Q9P2U8 582 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ZC3H7BQ9UGR2 993 aaKnown RBP16.02■□□□□ 0.16
DDB1-215ENST00000539712 TAC3Q9UHF0 121 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 ZNF451Q9Y4E5 1061 aa16.02■□□□□ 0.16
DDB1-215ENST00000539712 TTC4O95801 387 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms