RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 PPP1R3AQ16821 1122 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 ZC3H12BQ5HYM0 836 aaKnown RBP20.48■□□□□ 0.87
ARF3-206ENST00000539611 GRTP1Q5TC63 336 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 LCN10Q6JVE6 187 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 PCSK4Q6UW60 755 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 CEP128Q6ZU80 1094 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 LRRN4CLQ8ND94 238 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 TTC9Q92623 222 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 DPH7Q9BTV6 452 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 FUT8Q9BYC5 575 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 TSPYL1Q9H0U9 437 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 L2HGDHQ9H9P8 463 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 GPAMQ9HCL2 828 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 MRPS30Q9NP92 439 aaKnown RBP20.48■□□□□ 0.87
ARF3-206ENST00000539611 MRPS18BQ9Y676 258 aaKnown RBP20.48■□□□□ 0.87
ARF3-206ENST00000539611 AP1M2Q9Y6Q5 423 aa20.48■□□□□ 0.87
ARF3-206ENST00000539611 IGSF10Q6WRI0 2623 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 C21orf140B9A014 251 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 ZSCAN9O15535 394 aaPredicted RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 ENO2P09104 434 aaPredicted RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 SPRP35270 261 aaPredicted RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 TBPL1P62380 186 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 RHDQ02161 417 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 DNASE1L3Q13609 305 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 TSTA3Q13630 321 aaPredicted RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 ZNF425Q6IV72 752 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 RHBDD2Q6NTF9 364 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 FBXO42Q6P3S6 717 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 TLDC1Q6P9B6 456 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 AGTRAPQ6RW13 159 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 RNF44Q7L0R7 432 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 PAQR7Q86WK9 346 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 STARD8Q92502 1023 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 CLIP3Q96DZ5 547 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 BBC3Q96PG8 261 aaPredicted RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 RUFY1Q96T51 708 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 PLCD4Q9BRC7 762 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 CHST8Q9H2A9 424 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 CDC42EP4Q9H3Q1 356 aaKnown RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 ANKMY1Q9P2S6 941 aa20.47■□□□□ 0.87
ARF3-206ENST00000539611 NOVA2Q9UNW9 492 aaKnown RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 SMG1Q96Q15 3661 aaKnown RBP20.47■□□□□ 0.87
ARF3-206ENST00000539611 ZNF891A8MT65 544 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 CDC7O00311 574 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 NKX2-8O15522 239 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 KLK3P07288 261 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 CAPN1P07384 714 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 HBQ1P09105 142 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 HIST1H2AGP0C0S8 130 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 HIST1H2ADP20671 130 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 AP1S2P56377 157 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 ABATP80404 500 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 USP10Q14694 798 aaKnown RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 NAA25Q14CX7 972 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 CRTC2Q53ET0 693 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 FRMPD2BQ6IN97 320 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 ZNF655Q8N720 491 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 MR1Q95460 341 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 TSPAN17Q96FV3 270 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 HIST1H2AHQ96KK5 128 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 UBL7Q96S82 380 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 HIST1H2AJQ99878 128 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 H2AFJQ9BTM1 129 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 SGPP1Q9BX95 441 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 ATG10Q9H0Y0 220 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 SYNPO2LQ9H987 977 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 CCDC177Q9NQR7 707 aaPredicted RBP20.46■□□□□ 0.87
ARF3-206ENST00000539611 KCND3Q9UK17 655 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 FAM208BQ5VWN6 2430 aa20.46■□□□□ 0.87
ARF3-206ENST00000539611 ERVH48-1M5A8F1 160 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 PHGDHO43175 533 aaKnown RBP20.45■□□□□ 0.86
ARF3-206ENST00000539611 SRPX2O60687 465 aaPredicted RBP20.45■□□□□ 0.86
ARF3-206ENST00000539611 CCNDBP1O95273 360 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 SLC12A2P55011 1212 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 PTCHD3Q3KNS1 767 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 FBXL8Q96CD0 374 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 GBP5Q96PP8 586 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 SELENOSQ9BQE4 189 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 GPR87Q9BY21 358 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 ACSS3Q9H6R3 686 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 ABCF3Q9NUQ8 709 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 CUEDC1Q9NWM3 386 aaPredicted RBP20.45■□□□□ 0.86
ARF3-206ENST00000539611 ARL15Q9NXU5 204 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 SPTBP11277 2137 aa20.45■□□□□ 0.86
ARF3-206ENST00000539611 LOC105369274A0A096LPK9 316 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 LOC102723532A0A0G2JNH3 316 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 A0A0J9YVX5 310 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 FITM1A5D6W6 292 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 NPEPPSL1A6NEC2 478 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 STMN1P16949 149 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 PHBP35232 272 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 RELAQ04206 551 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 NAE1Q13564 534 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 COL9A2Q14055 689 aaPredicted RBP20.44■□□□□ 0.86
ARF3-206ENST00000539611 SOWAHCQ53LP3 525 aaPredicted RBP20.44■□□□□ 0.86
ARF3-206ENST00000539611 TCTE1Q5JU00 501 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 PRAMEF13Q5VWM6 474 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 FAM198BQ6UWH4 519 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 OR4N4Q8N0Y3 316 aa20.44■□□□□ 0.86
ARF3-206ENST00000539611 OR56A3Q8NH54 315 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms