RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PLOD1Q02809 727 aaPredicted RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 CBX3Q13185 183 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 PTK2BQ14289 1009 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 FBXO48Q5FWF7 155 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 FAM219BQ5XKK7 198 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 TMEM198Q66K66 360 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 MBOAT1Q6ZNC8 495 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 LILRA3Q8N6C8 439 aaPredicted RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 OR52B6Q8NGF0 335 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 OR2L2Q8NH16 312 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 ZFP28Q8NHY6 868 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 HM13Q8TCT9 377 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 ESAMQ96AP7 390 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 TMEM159Q96B96 161 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 C3orf30Q96M34 536 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 KCNA7Q96RP8 456 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 CCT7Q99832 543 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 LGR4Q9BXB1 951 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 GPR174Q9BXC1 333 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 MRPL1Q9BYD6 325 aaKnown RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 DPEP2Q9H4A9 486 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 WDR26Q9H7D7 661 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 FZD3Q9NPG1 666 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 MRPL40Q9NQ50 206 aaKnown RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 WWOXQ9NZC7 414 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 FAF1Q9UNN5 650 aaPredicted RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 OR1A2Q9Y585 309 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 TDRD6O60522 2096 aaKnown RBP8.59□□□□□ -1.03
DDB1-213ENST00000539332 USP34Q70CQ2 3546 aa8.59□□□□□ -1.03
DDB1-213ENST00000539332 CROCCQ5TZA2 2017 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SH3PXD2BA1X283 911 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ARHGEF33A8MVX0 844 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 MEI4A8MW99 385 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 AXIN1O15169 862 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 VPS4BO75351 444 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 STK16O75716 305 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 THRAP10827 490 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 EPORP19235 508 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 NCF2P19878 526 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 PIK3R1P27986 724 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 HOXA6P31267 233 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 IGFALSP35858 605 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 CCR5P51681 352 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 EMP3P54852 163 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ERVPABLB-1P60509 514 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 RPA4Q13156 261 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 GTF2H3Q13889 308 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SQLEQ14534 574 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 RBBP7Q16576 425 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 LRRC36Q1X8D7 754 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 GGTA1PQ4G0N0 100 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SYTL3Q4VX76 610 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PDCD4Q53EL6 469 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 KIAA0895LQ68EN5 471 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 RNF111Q6ZNA4 994 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PATL1Q86TB9 770 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 TRAPPC5Q8IUR0 188 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SMYD1Q8NB12 490 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 DENND6BQ8NEG7 585 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 HMGCLL1Q8TB92 370 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 BIRC7Q96CA5 298 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 EGFL8Q99944 293 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 MYOCQ99972 504 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 TRIM54Q9BYV2 358 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SLC29A3Q9BZD2 475 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 GRIP2Q9C0E4 1043 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SLC32A1Q9H598 525 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 NOL11Q9H8H0 719 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 IPPKQ9H8X2 491 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ARL15Q9NXU5 204 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 OPTCQ9UBM4 332 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 POLG2Q9UHN1 485 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 FIS1Q9Y3D6 152 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 COPG1Q9Y678 874 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 AP4B1Q9Y6B7 739 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 CABIN1Q9Y6J0 2220 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ARHGEF17Q96PE2 2063 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 DYTNA2CJ06 578 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 POM121BA6NF01 834 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 MGAT4DA6NG13 374 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PRR19A6NJB7 356 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 SNRNP200O75643 2136 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 PDE5AO76074 875 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 WDR47O94967 919 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 OR4F21O95013 312 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 GUCA1CO95843 209 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 CATP04040 527 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 EBLN1P0CF75 366 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 MYCLP1P12525 358 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 COX4I1P13073 169 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PORP16435 677 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms