RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GLRBP48167 497 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 NPY2RP49146 381 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
VAMP1-206ENST00000538970 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 RNF187Q5TA31 235 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-206ENST00000538970 AGAP7PQ5VUJ5 663 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 IRAK1BP1Q5VVH5 260 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MAMDC2Q7Z304 686 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-206ENST00000538970 OTUD6BQ8N6M0 293 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MFSD3Q96ES6 412 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 FOPNLQ96NB1 174 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 AGAP4Q96P64 663 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MESP1Q9BRJ9 268 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 CRB3Q9BUF7 120 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 KIFC1Q9BW19 673 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 LHPPQ9H008 270 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 AGPAT4Q9NRZ5 378 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 SLC5A6Q9Y289 635 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 DRG1Q9Y295 367 aaKnown RBP11.95□□□□□ -0.5
VAMP1-206ENST00000538970 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MAU2Q9Y6X3 613 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 LOC102723532A0A0G2JNH3 316 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 GOLGA8KD6RF30 607 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 GOLGA8TH3BQL2 631 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 E2F3O00716 465 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 VAPBO95292 243 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ERGP11308 486 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 TPSB2P20231 275 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 FMO4P31512 558 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 TSFMP43897 325 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 CARSP49589 748 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ADARP55265 1226 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 KLC1Q07866 573 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 Q0VFX4 171 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ELOAQ14241 798 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 FASTKQ14296 549 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 NAA25Q14CX7 972 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 TPSAB1Q15661 275 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 C1QL3Q5VWW1 255 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 MRNIPQ6NTE8 343 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 PRMT9Q6P2P2 845 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 LRRC8BQ6P9F7 803 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 CES3Q6UWW8 571 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ST6GALNAC3Q8NDV1 305 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 STT3BQ8TCJ2 826 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 MAGEC3Q8TD91 643 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 COG1Q8WTW3 980 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 THOC3Q96J01 351 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 C10orf90Q96M02 699 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 C5orf34Q96MH7 638 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ZFYVE21Q9BQ24 234 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 EPS8L2Q9H6S3 715 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF282Q9UDV7 671 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 ZC3H7BQ9UGR2 993 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
VAMP1-206ENST00000538970 SOX13Q9UN79 622 aa11.94□□□□□ -0.5
VAMP1-206ENST00000538970 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 IGLV3-12A0A075B6K2 115 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 H3BMM5 538 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 MYO1CO00159 1063 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 HPP00738 406 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 FGGP02679 453 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ESR1P03372 595 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 EIF2S1P05198 315 aaKnown RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ZGLP1P0C6A0 271 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ERVK-10P10266 1014 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ACPPP15309 386 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 OGNP20774 298 aaKnown RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 GRNP28799 593 aaKnown RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 CMPK1P30085 196 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 KCNJ1P48048 391 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 CDK16Q00536 496 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 OCA2Q04671 838 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 KCTD19Q17RG1 926 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 B3GNTL1Q67FW5 361 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 KIAA0930Q6ICG6 404 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 SDCCAG8Q86SQ7 713 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-206ENST00000538970 KCNMB4Q86W47 210 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 DNAJB14Q8TBM8 379 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 MIEF2Q96C03 454 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 CNDP1Q96KN2 507 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 TCF12Q99081 682 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 DPH7Q9BTV6 452 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 ACAT2Q9BWD1 397 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 SYNPO2LQ9H987 977 aa11.93□□□□□ -0.5
VAMP1-206ENST00000538970 STOX2Q9P2F5 926 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms