RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 TSPAN12O95859 305 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 RPA3P35244 121 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 PMS2P54278 862 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 CYP4F2P78329 520 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 KCNAB2Q13303 367 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 LY6DQ14210 128 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 SSPNQ14714 243 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 HECTD2Q5U5R9 776 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 ICE2Q659A1 982 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 PAQR3Q6TCH7 311 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 UBE2R2Q712K3 238 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 ZC3HC1Q86WB0 502 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 ZBED8Q8IZ13 594 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 NKAPQ8N5F7 415 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 TTC29Q8NA56 475 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 ATL1Q8WXF7 558 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 CDKL2Q92772 493 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 TRIM54Q9BYV2 358 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 SPRTNQ9H040 489 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 RHOJQ9H4E5 214 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 MRPS30Q9NP92 439 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 NXT1Q9UKK6 140 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 RUVBL2Q9Y230 463 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 PCDHGB7Q9Y5F8 929 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 MRPS18BQ9Y676 258 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 KCNE1BA0A087WTH5 132 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 DSCR3O14972 297 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HCRTR1O43613 425 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 CTSVO60911 334 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HIST1H2AGP0C0S8 130 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 ZNF37AP17032 561 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HIST1H2ADP20671 130 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 MCM3P25205 808 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 IMPA1P29218 277 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 CDKN2DP55273 166 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 CDKL1Q00532 357 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 CUL1Q13616 776 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 ERV3-1Q14264 604 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 FASTKQ14296 549 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 NKAIN1Q4KMZ8 207 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PRAMEF17Q5VTA0 474 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 GARNL3Q5VVW2 1013 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 MRPL14Q6P1L8 145 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PRMT9Q6P2P2 845 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 C16orf46Q6P387 395 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM199XQ6PEV8 388 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PIWIL4Q7Z3Z4 852 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PAQR7Q86WK9 346 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HPS6Q86YV9 775 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 ZNF655Q8N720 491 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 EEF1AKMT1Q8WVE0 214 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 THAP11Q96EK4 314 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 VPS39Q96JC1 886 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HIST1H2AHQ96KK5 128 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 MIPEPQ99797 713 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 HIST1H2AJQ99878 128 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 SELENOSQ9BQE4 189 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 H2AFJQ9BTM1 129 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 DPH7Q9BTV6 452 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 SARGQ9BW04 601 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 SEMA4CQ9C0C4 833 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 WDR54Q9H977 334 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 TMEM184CQ9NVA4 438 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 PDE10AQ9Y233 779 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 MED13Q9UHV7 2174 aa11.79□□□□□ -0.52
CLTCL1-205ENST00000538828 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 KLHL41O60662 606 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 RFPL1O75677 317 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 KLF7O75840 302 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM87AP0C7U9 286 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 PRKAR1AP10644 381 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 PSMB5P28074 263 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 POU4F1Q01851 419 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 C2orf54Q08AI8 447 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 NAB1Q13506 487 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 FASTKD3Q14CZ7 662 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 MUM1Q2TAK8 710 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 PRTGQ2VWP7 1150 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 DEFB110Q30KQ9 67 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 DEFB109BQ30KR1 87 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 FBXO42Q6P3S6 717 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 MED25Q71SY5 747 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 TAX1BP1Q86VP1 789 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 RAB43Q86YS6 212 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 RELL1Q8IUW5 271 aa11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 C17orf53Q8N3J3 647 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-205ENST00000538828 C2orf73Q8N5S3 287 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms