RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GRAMD1AQ96CP6 724 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 CCDC138Q96M89 665 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 CMKLR1Q99788 373 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 RAB11FIP5Q9BXF6 653 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 AKIRIN1Q9H9L7 192 aaPredicted RBP12.58□□□□□ -0.4
CHFR-216ENST00000538235 ACSS2Q9NR19 701 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ARL15Q9NXU5 204 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ACOT9Q9Y305 439 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 KLK4Q9Y5K2 254 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 SEC16AO15027 2179 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 NUP210LQ5VU65 1888 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 A0A087X1B8 175 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 LOC105369274A0A096LPK9 316 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 LOC102723532A0A0G2JNH3 316 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 TARM1B6A8C7 271 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 HAT1O14929 419 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 P2RX6O15547 441 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 ZW10O43264 779 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 KERAO60938 352 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 KLHL2O95198 593 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 DLGAP3O95886 979 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 STATHP02808 62 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 SNRPAP09012 282 aaKnown RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 ENO2P09104 434 aaPredicted RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 JMJD7P0C870 316 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 FGF5P12034 268 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 CREB1P16220 341 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 NPPBP16860 134 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 WT1P19544 449 aaPredicted RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 MAP4P27816 1152 aaKnown RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 AP1S2P56377 157 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 ATP6V0D1P61421 351 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 HSD11B2P80365 405 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 CDKL1Q00532 357 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 ZNF844Q08AG5 666 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 TUBB3Q13509 450 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PRAMEF13Q5VWM6 474 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PWWP2BQ6NUJ5 590 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 FIGLAQ6QHK4 219 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 RNF44Q7L0R7 432 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 KLHDC8AQ8IYD2 350 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 OR4N4Q8N0Y3 316 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 MAGEC3Q8TD91 643 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 MCOLN3Q8TDD5 553 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 ALKBH8Q96BT7 664 aaKnown RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 MED8Q96G25 268 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 RUFY1Q96T51 708 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 DPH7Q9BTV6 452 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 SOHLH2Q9NX45 425 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 SLC39A1Q9NY26 324 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 TMEM216Q9P0N5 145 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 XPR1Q9UBH6 696 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PLAAQ9Y263 795 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PCDHGA3Q9Y5H0 932 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 AK5Q9Y6K8 562 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 KMT2BQ9UMN6 2715 aaPredicted RBP12.57□□□□□ -0.4
CHFR-216ENST00000538235 SCN2AQ99250 2005 aa12.57□□□□□ -0.4
CHFR-216ENST00000538235 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 TMX2-CTNND1H3BSU7 103 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 KLK8O60259 260 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 KRT38O76015 456 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 PYGBP11216 843 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 CDH1P12830 882 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 CD22P20273 847 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ITGAXP20702 1163 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 MLLT3P42568 568 aaPredicted RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 HSPA7P48741 367 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 TUBB4BP68371 445 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 MEF2AQ02078 507 aaPredicted RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 FOXM1Q08050 763 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 SF1Q15637 639 aaKnown RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 CATSPEREQ5SY80 951 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 BEND6Q5SZJ8 279 aaPredicted RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 ADNP2Q6IQ32 1131 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 TTC23LQ6PF05 361 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 RPS27LQ71UM5 84 aaKnown RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 TBC1D1Q86TI0 1168 aaPredicted RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 KMT5CQ86Y97 462 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 CARFQ8N187 725 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ZNF740Q8NDX6 193 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ZCCHC14Q8WYQ9 949 aaKnown RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 NEIL2Q969S2 332 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 MOCOSQ96EN8 888 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ZNF285Q96NJ3 590 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ZIM3Q96PE6 472 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 DDA1Q9BW61 102 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 SPRTNQ9H040 489 aaPredicted RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 FBXO8Q9NRD0 319 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 LGALS13Q9UHV8 139 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms