RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TFB2MQ9H5Q4 396 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GOLGA2P5Q9HBQ8 144 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GDAP2Q9NXN4 497 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CD84Q9UIB8 345 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 RIMKLBQ9ULI2 386 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TMEM5Q9Y2B1 443 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GREB1LQ9C091 1923 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF878C9JN71 531 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PCDH7O60245 1069 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ENTPD6O75354 484 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 EPCAMP16422 314 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 HK1P19367 917 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PGDP52209 483 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 OR12D2P58182 307 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 SGCBQ16585 318 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 RBM48Q5RL73 367 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PDE12Q6L8Q7 609 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 IQCHQ86VS3 1027 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 DENND6BQ8NEG7 585 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 OLIG1Q8TAK6 271 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PLD4Q96BZ4 506 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ANKHQ9HCJ1 492 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CENPMQ9NSP4 180 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TEX13CA0A0J9YWL9 993 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 A0A1B0GVC2 190 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 HYKKA2RU49 373 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CCL22O00626 93 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 YES1P07947 543 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CXCR1P25024 350 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 NMBRP28336 390 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 AQP4P55087 323 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 MTPNP58546 118 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 EVX2Q03828 476 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GAD2Q05329 585 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 MERTKQ12866 999 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 GPR33Q49SQ1 333 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 FAM76BQ5HYJ3 339 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 KIAA1161Q6NSJ0 714 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ABHD15Q6UXT9 468 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 C15orf52Q6ZUT6 534 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PACRGLQ8N7B6 248 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF527Q8NB42 609 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 TRPM4Q8TD43 1214 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 EPYCQ99645 322 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 MRPS30Q9NP92 439 aaKnown RBP10.41□□□□□ -0.74
CLIP1-209ENST00000537178 PCDHGB6Q9Y5F9 930 aa10.41□□□□□ -0.74
CLIP1-209ENST00000537178 RCBTB2O95199 551 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 PLGP00747 810 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 FKBP1BP68106 108 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 HERC3Q15034 1050 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.743e-6■■■■■ 26.9
CLIP1-209ENST00000537178 AMZ2Q86W34 360 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 MARCH9Q86YJ5 346 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 HID1Q8IV36 788 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF101Q8IZC7 436 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 COL21A1Q96P44 957 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 ZSCAN5AQ9BUG6 496 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 RNF121Q9H920 327 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 TREM1Q9NP99 234 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 DUS2Q9NX74 493 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 FETUBQ9UGM5 382 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 ZFP37Q9Y6Q3 630 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 SLC31A1O15431 190 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 NOBOXO60393 691 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 C4BPAP04003 597 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 GSTT2P0CG29 244 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 CDH1P12830 882 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 TCEA1P23193 301 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 NDUFS1P28331 727 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 CHAF1BQ13112 559 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 SCARB2Q14108 478 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 VITQ6UXI7 678 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 SIDT2Q8NBJ9 832 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 FBXO22Q8NEZ5 403 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 HMCESQ96FZ2 354 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 NUDT15Q9NV35 164 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 IGSF9Q9P2J2 1179 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 TNFRSF10DQ9UBN6 386 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 H0YGN5 161 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 EI24O14681 340 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 CCL16O15467 120 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 RAB36O95755 333 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 CYP11A1P05108 521 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 EFNA1P20827 205 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 DNAJA1P31689 397 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 CASRP41180 1078 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 NCBP2P52298 156 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 FOXM1Q08050 763 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 FASTKD3Q14CZ7 662 aaKnown RBP10.4□□□□□ -0.74
CLIP1-209ENST00000537178 GRK1Q15835 563 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 OCLNQ16625 522 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 HSDL1Q3SXM5 330 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 ALG10BQ5I7T1 473 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 RALGPS1Q5JS13 557 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 TUBA3EQ6PEY2 450 aa10.4□□□□□ -0.74
CLIP1-209ENST00000537178 DRICH1Q6PGQ1 229 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms