RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
CCDC60-203ENST00000536742 ANK2Q01484 3957 aa6.31□□□□□ -1.4
CCDC60-203ENST00000536742 TRGV8A0A0C4DH27 118 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 A0A0U1RQS6 177 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 FPGTO14772 594 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 OGTO15294 1046 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 ZBTB43O43298 467 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 JRKO75564 520 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 KLKB1P03952 638 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 SRPRAP08240 638 aaKnown RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 DHRS4L1P0CG22 281 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 HSD3B1P14060 373 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CTSEP14091 401 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 HOXD9P28356 352 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 THBS4P35443 961 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 B4GALNT1Q00973 533 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CNTN1Q12860 1018 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 EFR3AQ14156 821 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 VWA5B1Q5TIE3 1220 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 RANBP10Q6VN20 620 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 ACOT1Q86TX2 421 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CHSY1Q86X52 802 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 PNLDC1Q8NA58 520 aaKnown RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 SCAMP5Q8TAC9 235 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 GRHL3Q8TE85 626 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 ASB12Q8WXK4 309 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 SPAG5Q96R06 1193 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CTRCQ99895 268 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 VPS16Q9H269 839 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 TCEAL2Q9H3H9 227 aaPredicted RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 FBXO44Q9H4M3 255 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 C17orf75Q9HAS0 396 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 AGO1Q9UL18 857 aaKnown RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 DAPP1Q9UN19 280 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 SONP18583 2426 aaKnown RBP6.3□□□□□ -1.4
CCDC60-203ENST00000536742 CACNA1CQ13936 2221 aa6.3□□□□□ -1.4
CCDC60-203ENST00000536742 ITIH6Q6UXX5 1313 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 C21orf140B9A014 251 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TISP43B9A030 160 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 POLR1CO15160 346 aaPredicted RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 B4GAT1O43505 415 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 HCRTO43612 131 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TMEM63AO94886 807 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ZWINTO95229 277 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ALDOAP04075 364 aaKnown RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ALPPP05187 535 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 THRAP10827 490 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 IGFBP2P18065 325 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 CORO1AP31146 461 aaKnown RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TAS2R38P59533 333 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 AKAP17AQ02040 695 aaKnown RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 PPARDQ03181 441 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 RPS6KA2Q15349 733 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 BTBD16Q32M84 506 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ADCK5Q3MIX3 580 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 AMZ1Q400G9 498 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SHEQ5VZ18 495 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 Q6ZS92 163 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TECPR1Q7Z6L1 1165 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SFR1Q86XK3 245 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 FAM217AQ8IXS0 508 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ZADH2Q8N4Q0 377 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 OR1N1Q8NGS0 311 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 CCDC127Q96BQ5 260 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TRAPPC9Q96Q05 1148 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 NPAS1Q99742 590 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SLX1AQ9BQ83 275 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SORBS1Q9BX66 1292 aaKnown RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SLC17A9Q9BYT1 436 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 NUAK2Q9H093 628 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
CCDC60-203ENST00000536742 TUFT1Q9NNX1 390 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 KIF17Q9P2E2 1029 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 KCNN3Q9UGI6 736 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 ERVW-1Q9UQF0 538 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 SNX9Q9Y5X1 595 aa6.29□□□□□ -1.4
CCDC60-203ENST00000536742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCDC60-203ENST00000536742 NYNRINQ9P2P1 1898 aaKnown RBP6.28□□□□□ -1.4
CCDC60-203ENST00000536742 FAM189A1O60320 539 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 CCNT1O60563 726 aaKnown RBP6.28□□□□□ -1.4
CCDC60-203ENST00000536742 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
CCDC60-203ENST00000536742 LMO2P25791 158 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 NDUFS1P28331 727 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 TACR3P29371 465 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 SERPINA4P29622 427 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 CDC25AP30304 524 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 GRK5P34947 590 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 NNMTP40261 264 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 CA7P43166 264 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 CASP6P55212 293 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 PROK1P58294 105 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 OTUD4Q01804 1114 aaKnown RBP6.28□□□□□ -1.4
CCDC60-203ENST00000536742 FOXF2Q12947 444 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 SOWAHAQ2M3V2 549 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 MDH1BQ5I0G3 518 aa6.28□□□□□ -1.4
CCDC60-203ENST00000536742 EFHC1Q5JVL4 640 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms