RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	UBXN1	Q04323	297 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	RBBP7	Q16576	425 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	ACCSL	Q4AC99	568 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	OR4A47	Q6IF82	309 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	ISCA2	Q86U28	154 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	CLYBL	Q8N0X4	340 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	CARNMT1	Q8N4J0	409 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZNF383	Q8NA42	475 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	DBF4B	Q8NFT6	615 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	KBTBD8	Q8NFY9	601 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	OR10Q1	Q8NGQ4	319 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	OLIG1	Q8TAK6	271 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC26A7	Q8TE54	656 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	TSACC	Q96A04	125 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	PKP4	Q99569	1192 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	MRPL9	Q9BYD2	267 aa	Known RBP	4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	TLE6	Q9H808	572 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	TRPV4	Q9HBA0	871 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	IL1RAPL2	Q9NP60	686 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	TMEM161A	Q9NX61	479 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	LEF1	Q9UJU2	399 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	ACE	P12821	1306 aa		4.96	□□□□□ -1.62
PRKDC-208	ENST00000536710	KBTBD13	C9JR72	458 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CIDEA	O60543	219 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	ANKRD34C	P0C6C1	535 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	EEF2	P13639	858 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	EFNA1	P20827	205 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	MARK3	P27448	753 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	NPBWR1	P48145	328 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	SNU13	P55769	128 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CLDN15	P56746	228 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	ASIC1	P78348	528 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	POU3F1	Q03052	451 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	SULT2A1	Q06520	285 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	MORF4L2	Q15014	288 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	IQCC	Q4KMZ1	466 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	TECRL	Q5HYJ1	363 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CTR9	Q6PD62	1173 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	PIGW	Q7Z7B1	504 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	MAPKAPK5-AS1	Q8N8E1	139 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	SEPT1	Q8WYJ6	367 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	KLHL5	Q96PQ7	755 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	EPYC	Q99645	322 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	TRMT61B	Q9BVS5	477 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CDK19	Q9BWU1	502 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC5A7	Q9GZV3	580 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CHST11	Q9NPF2	352 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	ZFP57	Q9NU63	452 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	DNAJC17	Q9NVM6	304 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	P4HTM	Q9NXG6	502 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CNIH4	Q9P003	139 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	FBXL5	Q9UKA1	691 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	TNN	Q9UQP3	1299 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	RUVBL2	Q9Y230	463 aa	Known RBP	4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	CHKB	Q9Y259	395 aa		4.95	□□□□□ -1.62
PRKDC-208	ENST00000536710	IGLV9-49	A0A0B4J1Y8	123 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710		A0A1W2PRV1	198 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	BAG2	O95816	211 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	IGHV4-38-2	P0DP08	117 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	DARS	P14868	501 aa	Known RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	LIF	P15018	202 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CCKAR	P32238	428 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	NKX2-1	P43699	371 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CDX1	P47902	265 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	MAZ	P56270	477 aa	Known RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	ERVFC1-1	P60608	527 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	STX1B	P61266	288 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CACNG1	Q06432	222 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	C17orf67	Q0P5P2	114 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	TRAP1	Q12931	704 aa	Known RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	SQLE	Q14534	574 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	WDR38	Q5JTN6	314 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC35D3	Q5M8T2	416 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC10A5	Q5PT55	438 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CCNYL2	Q5T2Q4	361 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	FAM46C	Q5VWP2	391 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	LYSMD4	Q5XG99	296 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	WBP2NL	Q6ICG8	309 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	BTNL8	Q6UX41	500 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	KCTD9	Q7L273	389 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	SLC26A9	Q7LBE3	791 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CIART	Q8N365	385 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	OR13C3	Q8NGS6	347 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	OR52N5	Q8NH56	324 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	NCOA7	Q8NI08	942 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	KRT35	Q92764	455 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	P2RX5	Q93086	422 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	SGF29	Q96ES7	293 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	CACNG6	Q9BXT2	260 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	RIMS4	Q9H426	269 aa	Predicted RBP	4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	ADPRHL2	Q9NX46	363 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	ITM2B	Q9Y287	266 aa		4.94	□□□□□ -1.62
PRKDC-208	ENST00000536710	HEG1	Q9ULI3	1381 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	SMIM30	A4D0T7	59 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	PRSS46	E5RG02	174 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710		F8VVB4	439 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710		F8VWA3	439 aa		4.93	□□□□□ -1.62
PRKDC-208	ENST00000536710	ATP6V0E1	O15342	81 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms