RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ROPN1Q9HAT0 212 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 APMAPQ9HDC9 416 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 PDE7BQ9NP56 450 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 SLC6A20Q9NP91 592 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ASCL3Q9NQ33 180 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 FBXO8Q9NRD0 319 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 IGKV1-8A0A0C4DH67 115 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CCDC189A1A4V9 331 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CDRT15L2A8MXV6 281 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 SUPT3HB4E1H0 165 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 C9orf172C9J069 976 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 UBXN8O00124 270 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TAPBPO15533 448 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 SUPT3HO75486 399 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 MTHFD2P13995 350 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 NPPBP16860 134 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 KRT15P19012 456 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CCND1P24385 295 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 RBMS1P29558 406 aaKnown RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 HNMTP50135 292 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 ABATP80404 500 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 PRDX1Q06830 199 aaKnown RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 FOXM1Q08050 763 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CYP4F3Q08477 520 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 ZNF844Q08AG5 666 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TSNAXIP1Q2TAA8 658 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 PTCHD3Q3KNS1 767 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TECRLQ5HYJ1 363 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TMTC4Q5T4D3 741 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 PRAMEF13Q5VWM6 474 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CAPN13Q6MZZ7 669 aaPredicted RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 KLC3Q6P597 504 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 FIGLAQ6QHK4 219 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 SH2D5Q6ZV89 423 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 LSMEM2Q8N112 164 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 RIBC1Q8N443 379 aaPredicted RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 ZUFSPQ96AP4 578 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 OR4K3Q96R72 315 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TAAR9Q96RI9 348 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 TMEM79Q9BSE2 394 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 DPH7Q9BTV6 452 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 PCBD2Q9H0N5 130 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 FGF21Q9NSA1 209 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 FAM53CQ9NYF3 392 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 NUDT4Q9NZJ9 180 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 CD274Q9NZQ7 290 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 LGALS13Q9UHV8 139 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 PTBP2Q9UKA9 531 aaKnown RBP11.6□□□□□ -0.55
CHD4-203ENST00000535717 SH2B3Q9UQQ2 575 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 ACACBO00763 2458 aa11.6□□□□□ -0.55
CHD4-203ENST00000535717 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 TARM1B6A8C7 271 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 POLR1CO15160 346 aaPredicted RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 MAP3K7O43318 606 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 HCRTR1O43613 425 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 NRP2O60462 931 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 CTSVO60911 334 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 CCNDBP1O95273 360 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 S100BP04271 92 aaPredicted RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 CAPNS1P04632 268 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 RBP1P09455 135 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 MSL3P1P0C860 447 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 C1QTNF9P0C862 333 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 GGT5P36269 586 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 GDF5P43026 501 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 SLC6A12P48065 614 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 GABRA4P48169 554 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 RAB15P59190 212 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 ACY1Q03154 408 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 TUBB3Q13509 450 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 IL11RAQ14626 422 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 FBXO48Q5FWF7 155 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 DCAF12Q5T6F0 453 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 SULT1C3Q6IMI6 304 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 LCTLQ6UWM7 567 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 THOC6Q86W42 341 aaKnown RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 KLHDC8AQ8IYD2 350 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 TCAIMQ8N3R3 496 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 TMEM151AQ8N4L1 468 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 DNAJC22Q8N4W6 341 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 MDM1Q8TC05 714 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 ZNF501Q96CX3 271 aaPredicted RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 SCYL1Q96KG9 808 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 TSNARE1Q96NA8 513 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 ZIM3Q96PE6 472 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 DDA1Q9BW61 102 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 CUEDC1Q9NWM3 386 aaPredicted RBP11.59□□□□□ -0.55
CHD4-203ENST00000535717 WWOXQ9NZC7 414 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 FOXJ2Q9P0K8 574 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 SLC22A14Q9Y267 594 aa11.59□□□□□ -0.55
CHD4-203ENST00000535717 PCDHGA7Q9Y5G6 932 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms