RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MMP25Q9NPA2 562 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 PFDN4Q9NQP4 134 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.19□□□□□ -1.9
SNHG1-202ENST00000535689 PXMP2Q9NR77 195 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 WWOXQ9NZC7 414 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 EPS15L1Q9UBC2 864 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 POLG2Q9UHN1 485 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 TUBE1Q9UJT0 475 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 GRIP1Q9Y3R0 1128 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 TMEM184BQ9Y519 407 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-202ENST00000535689 TRPV2Q9Y5S1 764 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 PLIN4Q96Q06 1357 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 C2orf16Q68DN1 1984 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 GCN1Q92616 2671 aaKnown RBP3.19□□□□□ -1.9
SNHG1-202ENST00000535689 MYH15Q9Y2K3 1946 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
SNHG1-202ENST00000535689 ASPMQ8IZT6 3477 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 DENND4AQ7Z401 1863 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 DOCK5Q9H7D0 1870 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 FLNBO75369 2602 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 A0A1W2PS18 150 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 TCRBV21S2A2A0A5A6 115 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 C1orf226A1L170 272 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MBLAC1A4D2B0 266 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 AGAP14A8MT82 685 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CLGNO14967 610 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ANKRD28O15084 1053 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 RNF113AO15541 343 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 WDR1O75083 606 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 BEST1O76090 585 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 FTCDO95954 541 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ALPLP05186 524 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CENPBP07199 599 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ABCB1P08183 1280 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ACAA1P09110 424 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF806P0C7X5 589 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CEACAM1P13688 526 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 POLR2CP19387 275 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 EDN2P20800 178 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 EEF1B2P24534 225 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 TKTP29401 623 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CD52P31358 61 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 HADHAP40939 763 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PI4KAP42356 2102 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 RAD52P43351 418 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CXCL12P48061 93 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 HOXA1P49639 335 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 THBS3P49746 956 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 DSCR9P59020 149 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MGAT3Q09327 533 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MYBPHQ13203 477 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 FHL1Q13642 323 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 HNRNPDQ14103 355 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PSMD6Q15008 389 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ASIC2Q16515 512 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ASTE1Q2TB18 679 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 USH1GQ495M9 461 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 TCP11X2Q5H9J9 407 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PDSS1Q5T2R2 415 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 WDR73Q6P4I2 378 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF517Q6ZMY9 492 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 IQCA1Q86XH1 822 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 GPR65Q8IYL9 337 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PM20D2Q8IYS1 436 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 SAMD14Q8IZD0 417 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 DCP1BQ8IZD4 617 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 FAM9BQ8IZU0 186 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 LRRC43Q8N309 656 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 SLC5A8Q8N695 610 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PCDH20Q8N6Y1 951 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 Q8N9P0 234 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 EXD1Q8NHP7 514 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 B4GALNT2Q8NHY0 566 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 TMEM255BQ8WV15 326 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 ASB5Q8WWX0 329 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CLDN23Q96B33 292 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MTERF3Q96E29 417 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CEP295NLQ96MC4 621 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MYADMQ96S97 322 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 BOLA2Q9H3K6 86 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 RNF41Q9H4P4 317 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CWH43Q9H720 699 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 MRPL17Q9NRX2 175 aaKnown RBP3.18□□□□□ -1.9
SNHG1-202ENST00000535689 FAM118AQ9NWS6 357 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 SLC9A2Q9UBY0 812 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 KLHL20Q9Y2M5 609 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 YIPF1Q9Y548 306 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 CLIC4Q9Y696 253 aa3.18□□□□□ -1.9
SNHG1-202ENST00000535689 DMXL2Q8TDJ6 3036 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 NUP205Q92621 2012 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 IGKV2D-30A0A075B6S6 120 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SAA2-SAA4A0A096LPE2 208 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SRRM3A6NNA2 597 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 HIDE1A8MVS5 230 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CAPN9O14815 690 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 GPAA1O43292 621 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PRDM1O75626 825 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PDE9AO76083 593 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms