RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SNX12Q9UMY4 172 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 KLK4Q9Y5K2 254 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 COMMD10Q9Y6G5 202 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 FITM1A5D6W6 292 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 AGPSO00116 658 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 CES2O00748 559 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ZBTB14O43829 449 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 VPS26AO75436 327 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ONECUT2O95948 504 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 UMODP07911 640 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 F7P08709 466 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MPC1LP0DKB6 136 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ERGP11308 486 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ENO3P13929 434 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ITGAXP20702 1163 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MMP11P24347 488 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MAGEA3P43357 314 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 PNLIPRP1P54315 467 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MYBPC3Q14896 1274 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 NKG7Q16617 165 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 HSP90AA5PQ58FG0 334 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 JMJD6Q6NYC1 403 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 PCGF5Q86SE9 256 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 METTL27Q8N6F8 245 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 COL26A1Q96A83 441 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 VPS50Q96JG6 964 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 GPR21Q99679 349 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 SLC30A3Q99726 388 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ZFYVE21Q9BQ24 234 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 FAM167BQ9BTA0 163 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ZNF304Q9HCX3 659 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ENAMQ9NRM1 1142 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 IARS2Q9NSE4 1012 aaKnown RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 ABCF3Q9NUQ8 709 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MAP10Q9P2G4 905 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 NXT1Q9UKK6 140 aaKnown RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 DHRS7Q9Y394 339 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 MAU2Q9Y6X3 613 aa14.77□□□□□ -0.05
CPSF1-211ENST00000533492 RP1L1Q8IWN7 2480 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-211ENST00000533492 LOC105369274A0A096LPK9 316 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 LOC102723532A0A0G2JNH3 316 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 OR2A25A4D2G3 310 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 IPO13O94829 963 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 HAUS5O94927 633 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 CCNDBP1O95273 360 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 YBX1P67809 324 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 MPP1Q00013 466 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 OCA2Q04671 838 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 PRDX1Q06830 199 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 PTK6Q13882 451 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 MUM1Q2TAK8 710 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 RNASEH2BQ5TBB1 312 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 THEMIS2Q5TEJ8 643 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 UGT3A1Q6NUS8 523 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 PRMT9Q6P2P2 845 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 FBXO42Q6P3S6 717 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 ZNF549Q6P9A3 640 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 RNF44Q7L0R7 432 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 KCNMB4Q86W47 210 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 OR4N4Q8N0Y3 316 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 RBMXL3Q8N7X1 1067 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 ASB11Q8WXH4 323 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 CABS1Q96KC9 395 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 PLCD4Q9BRC7 762 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 DDX47Q9H0S4 455 aaKnown RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 SLC26A1Q9H2B4 701 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 SOX17Q9H6I2 414 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-211ENST00000533492 SLC6A20Q9NP91 592 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 LUZP4Q9P127 313 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 ANKMY1Q9P2S6 941 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 TAC3Q9UHF0 121 aa14.76□□□□□ -0.05
CPSF1-211ENST00000533492 FLNCQ14315 2725 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 H0YGG7 62 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 SMAPO00193 183 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 DNALI1O14645 258 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 NRP2O60462 931 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 SORBS2O94875 1100 aaKnown RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 SLC16A8O95907 504 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 TCP1P17987 556 aaKnown RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 PGAM1P18669 254 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 ITGA3P26006 1051 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 VARSP26640 1264 aaKnown RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 ARF3P61204 181 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 AIMP2Q13155 320 aaKnown RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 INPP5JQ15735 1006 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 RBBP7Q16576 425 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 IRAK1BP1Q5VVH5 260 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 ICE2Q659A1 982 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 SLC6A19Q695T7 634 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 SHISA6Q6ZSJ9 500 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 COX15Q7KZN9 410 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 ADCK2Q7Z695 626 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 TMEM151BQ8IW70 566 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 CPNE9Q8IYJ1 553 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 FAM26EQ8N5C1 309 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 FBXO15Q8NCQ5 510 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-211ENST00000533492 PPFIBP2Q8ND30 876 aa14.75□□□□□ -0.05
CPSF1-211ENST00000533492 GIMAP7Q8NHV1 300 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms