RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 A0A1W2PP18 115 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 CLIC1O00299 241 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 HAT1O14929 419 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 AREL1O15033 823 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 BCAS2O75934 225 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 CAPGP40121 348 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 PTPN5P54829 565 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 HTRA3P83110 453 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 GANABQ14697 944 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 USP39Q53GS9 565 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 LY6G5CQ5SRR4 150 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 ANXA8L1Q5VT79 327 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 GOLGA7Q7Z5G4 137 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 R3HCC1LQ7Z5L2 792 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 UMODL1-AS1Q8N2C9 162 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 ESX1Q8N693 406 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 TRPV3Q8NET8 790 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 NRG4Q8WWG1 115 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 TMBIM1Q969X1 311 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 C1GALT1C1Q96EU7 318 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
BDNF-218ENST00000533246 PDE10AQ9Y233 779 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 MYH4Q9Y623 1939 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 AQP9O43315 295 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 OR7A10O76100 309 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PGRP06401 933 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 UBL4AP11441 157 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 GSTM5P46439 218 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 GDI2P50395 445 aaKnown RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 NUDT6P53370 316 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 SH3BP2P78314 561 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 MEF2AQ02078 507 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 MXD1Q05195 221 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 ZBTB6Q15916 424 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 UNC50Q53HI1 259 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 TRIQKQ629K1 86 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 RANBP10Q6VN20 620 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PIH1D2Q8WWB5 315 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PRRG3Q9BZD7 231 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 B4GALT6Q9UBX8 382 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 GJB3O75712 270 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PTPN2P17706 415 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 KCNA5P22460 613 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 MS4A2Q01362 244 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 TOP3AQ13472 1001 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 CCNIQ14094 377 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 LSM14AQ8ND56 463 aaKnown RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 C12orf43Q96C57 262 aaKnown RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 BIRC7Q96CA5 298 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 IL12RB2Q99665 862 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 DUSP26Q9BV47 211 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 NUSAP1Q9BXS6 441 aaKnown RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 OR51B5Q9H339 312 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 ABCB9Q9NP78 766 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 SPATA2Q9UM82 520 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PCDHGA11Q9Y5H2 935 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 OR10H2O60403 315 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 CPNE3O75131 537 aaKnown RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 FABP3P05413 133 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 ARSAP15289 507 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 ITGA2P17301 1181 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 COX10Q12887 443 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 MTAPQ13126 283 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 CYP27C1Q4G0S4 372 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 CARD16Q5EG05 197 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 ZNF362Q5T0B9 420 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 PAQR9Q6ZVX9 377 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 PDSS2Q86YH6 399 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 UBE2J2Q8N2K1 259 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 AIF1LQ9BQI0 150 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 KCNK13Q9HB14 408 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 MAT2BQ9NZL9 334 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
BDNF-218ENST00000533246 DNAJC15Q9Y5T4 150 aa11.93□□□□□ -0.5
BDNF-218ENST00000533246 G3V2L1 256 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 GMFGO60234 142 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 FUCA1P04066 466 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 JUNP05412 331 aaKnown RBP11.92□□□□□ -0.5
BDNF-218ENST00000533246 RAP2AP10114 183 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 SRP54P61011 504 aaKnown RBP11.92□□□□□ -0.5
BDNF-218ENST00000533246 FAM189BP81408 668 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 MYBPC1Q00872 1141 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 RHAGQ02094 409 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 C5orf22Q49AR2 442 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 FGD2Q7Z6J4 655 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 KCT2Q8NC54 265 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 OR4K1Q8NGD4 311 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 ZNF486Q96H40 463 aaPredicted RBP11.92□□□□□ -0.5
BDNF-218ENST00000533246 ZNF599Q96NL3 588 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 CLEC4AQ9UMR7 237 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 OR10H1Q9Y4A9 318 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 PRORSD1PA6NEY8 169 aa11.92□□□□□ -0.5
BDNF-218ENST00000533246 B8ZZF3 427 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms