RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TRMT10BQ6PF06 316 aaKnown RBP29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 TTLL10Q6ZVT0 673 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 TTC29Q8NA56 475 aaPredicted RBP29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 PPFIBP2Q8ND30 876 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 EEF1AKMT1Q8WVE0 214 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 TRIM55Q9BYV6 548 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 SLC6A20Q9NP91 592 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 MRPS30Q9NP92 439 aaKnown RBP29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 PCM1Q15154 2024 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 A0A1B0GX78 115 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 OR2A25A4D2G3 310 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 ARGFXA6NJG6 315 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 E7ENX8 843 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 NDC80O14777 642 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 NRP2O60462 931 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 DNAJB5O75953 348 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 ATXN8OSP0DMR3 200 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 RGS4P49798 205 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 CDKN2DP55273 166 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 VSX2P58304 361 aaPredicted RBP29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 TAP2Q03519 686 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 FRG1Q14331 258 aaKnown RBP29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 CPZQ66K79 652 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 FRMPD2BQ6IN97 320 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 ATG14Q6ZNE5 492 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 RNF44Q7L0R7 432 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 ANKMY2Q8IV38 441 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 SPATA4Q8NEY3 305 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 CUTCQ9NTM9 273 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 ANKMY1Q9P2S6 941 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 TP53TG5Q9Y2B4 290 aa29.01■■■□□ 2.23
SSSCA1-207ENST00000533115 A0A0J9YVX5 310 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 FITM1A5D6W6 292 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 ETF1P62495 437 aaKnown RBP29■■■□□ 2.23
SSSCA1-207ENST00000533115 MRPS25P82663 173 aaKnown RBP29■■■□□ 2.23
SSSCA1-207ENST00000533115 PDIA2Q13087 525 aaKnown RBP29■■■□□ 2.23
SSSCA1-207ENST00000533115 SLC9A5Q14940 896 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 WASHC2DQ5SRD0 308 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 TCTN3Q6NUS6 607 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 MRPL14Q6P1L8 145 aaKnown RBP29■■■□□ 2.23
SSSCA1-207ENST00000533115 PAQR3Q6TCH7 311 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 BBOF1Q8ND07 529 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 ING2Q9H160 280 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 ACSS2Q9NR19 701 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 TAC3Q9UHF0 121 aa29■■■□□ 2.23
SSSCA1-207ENST00000533115 FAM187AA6NFU0 413 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 E7ESA3 106 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 DSCR3O14972 297 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 CCNDBP1O95273 360 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 PRDX1Q06830 199 aaKnown RBP28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 CHAF1BQ13112 559 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 ICE2Q659A1 982 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 FBXO42Q6P3S6 717 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 RAB43Q86YS6 212 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 LRRC56Q8IYG6 542 aaPredicted RBP28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 FBXO36Q8NEA4 188 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 ZFYVE21Q9BQ24 234 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 PLCD4Q9BRC7 762 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 SLC22A11Q9NSA0 550 aa28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 CORO1CQ9ULV4 474 aaPredicted RBP28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 PTRH2Q9Y3E5 179 aaKnown RBP28.99■■■□□ 2.23
SSSCA1-207ENST00000533115 LOC105369274A0A096LPK9 316 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 IGKV1-8A0A0C4DH67 115 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 LOC102723532A0A0G2JNH3 316 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 C8GP07360 202 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 ITGAXP20702 1163 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 IMPA1P29218 277 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 FOLR3P41439 243 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 SSPNQ14714 243 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 FAM214AQ32MH5 1076 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 SYT10Q6XYQ8 523 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 MAATS1Q7Z4T9 603 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 OR4N4Q8N0Y3 316 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 GPATCH11Q8N954 259 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 MCOLN3Q8TDD5 553 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 ERP44Q9BS26 406 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 ADAMTS6Q9UKP5 1117 aa28.98■■■□□ 2.23
SSSCA1-207ENST00000533115 K7EM74 188 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 CNOT3O75175 753 aaKnown RBP28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 ONECUT2O95948 504 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 PIM1P11309 404 aaPredicted RBP28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 NR1D1P20393 614 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 OTX2P32243 289 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 CBLBQ13191 982 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 FASTKD3Q14CZ7 662 aaKnown RBP28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 HECTD2Q5U5R9 776 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 PAQR7Q86WK9 346 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 PALM2Q8IXS6 379 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 MYO1HQ8N1T3 1032 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 OR2Y1Q8NGV0 311 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 LINGO1Q96FE5 620 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 ABCF3Q9NUQ8 709 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 UTP6Q9NYH9 597 aaKnown RBP28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 ANAPC2Q9UJX6 822 aa28.97■■■□□ 2.23
SSSCA1-207ENST00000533115 HYKKA2RU49 373 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 RAD51CO43502 376 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 CCL11P51671 97 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 ABATP80404 500 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 C2orf54Q08AI8 447 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 SP140Q13342 867 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms