RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RNF121Q9H920 327 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TLR9Q9NR96 1032 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HCFC1R1Q9NWW0 138 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 IL20Q9NYY1 176 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 INVSQ9Y283 1065 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SAMHD1Q9Y3Z3 626 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CNOT1A5YKK6 2376 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TCAF2A6NFQ2 919 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 INMT-MINDY4F8WBC2 141 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 NPHS1O60500 1241 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TLR5O60602 858 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CILPO75339 1184 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 GABARAPO95166 117 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 OR5F1O95221 314 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TSPAN8P19075 237 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SDC2P34741 201 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 NR2C2P49116 596 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 STARP49675 285 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 EEFSECP57772 596 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 DCDC1P59894 354 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SNTA1Q13424 505 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM187BQ17R55 369 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FSTL4Q6MZW2 842 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HFE2Q6ZVN8 426 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CIR1Q86X95 450 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC41A1Q8IVJ1 513 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 UBQLNLQ8IYU4 475 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TTC29Q8NA56 475 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 OR9I1Q8NGQ6 314 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HERVK_113Q902F9 699 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ST8SIA2Q92186 375 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 POP5Q969H6 163 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MUL1Q969V5 352 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ULK4Q96C45 1275 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LRRC58Q96CX6 371 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MYRFLQ96LU7 910 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 PPM1MQ96MI6 270 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TBCBQ99426 244 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 C12orf57Q99622 126 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SYT11Q9BT88 431 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 GPR88Q9GZN0 384 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MUC3BQ9H195 1237 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ANKRA2Q9H9E1 313 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LIN7BQ9HAP6 207 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ASAH2Q9NR71 780 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 AGPAT4Q9NRZ5 378 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM118AQ9NWS6 357 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HPF1Q9NWY4 346 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 DUS2Q9NX74 493 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CLCA3PQ9Y6N3 262 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM25EA8MYX2 175 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 DLGAP1O14490 977 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 EFCAB14O75071 495 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 AP2A2O94973 939 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LTFP02788 710 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC2A2P11168 524 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MYL12AP19105 171 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MAP2K3P46734 347 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MLLT6P55198 1093 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MXD1Q05195 221 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 PRKCDQ05655 676 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 BRMS1LQ5PSV4 323 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 GPR158Q5T848 1215 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 GDPD3Q7L5L3 318 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TBC1D19Q8N5T2 526 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 PLD5Q8N7P1 536 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LHFPL5Q8TAF8 219 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 PIWIL1Q96J94 861 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FYTTD1Q96QD9 318 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SORT1Q99523 831 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CINPQ9BW66 212 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 PBX4Q9BYU1 374 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 IL22Q9GZX6 179 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MCCC2Q9HCC0 563 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MARCH2Q9P0N8 246 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HCN3Q9P1Z3 774 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TSR3Q9UJK0 312 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 NCKAP1Q9Y2A7 1128 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 VPS9D1Q9Y2B5 631 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ASXL3Q9C0F0 2248 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 DICER1Q9UPY3 1922 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 A0A087X1B8 175 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 YJEFN3A6XGL0 299 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 WWP2O00308 870 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF780AO75290 641 aaPredicted RBP6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 LRCH4O75427 683 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 TRUB2O95900 331 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 HPRP00739 348 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 MLLT3P42568 568 aaPredicted RBP6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 PPP3CCP48454 512 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 TPI1P60174 286 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB10P61026 200 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 SMCO1Q147U7 214 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 PCBP1Q15365 356 aaKnown RBP eCLIP6.62□□□□□ -1.353e-6■□□□□ 9.7
TGFBR3-209ENST00000532540 CYBRD1Q53TN4 286 aa6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 INTS6LQ5JSJ4 861 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-209ENST00000532540 HES5Q5TA89 166 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms