RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PCBD2Q9H0N5 130 aa18.38■□□□□ 0.53
SMPD1-205ENST00000531303 EML4Q9HC35 981 aaKnown RBP18.38■□□□□ 0.53
SMPD1-205ENST00000531303 FIS1Q9Y3D6 152 aa18.38■□□□□ 0.53
SMPD1-205ENST00000531303 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 FAM221BA6H8Z2 402 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 OR5K3A6NET4 321 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 E7EQ34 232 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 GIPC1O14908 333 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CLGNO14967 610 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CASC3O15234 703 aaKnown RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 B4GAT1O43505 415 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 PRICKLE3O43900 615 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 SNNO75324 88 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 LDOC1O95751 146 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CDH1P12830 882 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 UGT2B7P16662 529 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 LSP1P33241 339 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 OCRLQ01968 901 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 IRF8Q02556 426 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CHIT1Q13231 466 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 XKR6Q5GH73 641 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CATSPEREQ5SY80 951 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 ICE2Q659A1 982 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 IRGCQ6NXR0 463 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 KLHL35Q6PF15 583 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 DBX2Q6ZNG2 339 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 RGS9BPQ6ZS82 235 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 GPRIN3Q6ZVF9 776 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 USP53Q70EK8 1073 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 ASCL5Q7RTU5 278 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 MILR1Q7Z6M3 343 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 TMPRSS11BQ86T26 416 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 SYVN1Q86TM6 617 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 C17orf64Q86WR6 236 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 OR2A1Q8NGT9 310 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 SLC5A11Q8WWX8 675 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 NCSTNQ92542 709 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 TRMOQ9BU70 441 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CCDC134Q9H6E4 229 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 ACTR8Q9H981 624 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 TNFRSF12AQ9NP84 129 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 CUEDC1Q9NWM3 386 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-205ENST00000531303 KLHL20Q9Y2M5 609 aa18.37■□□□□ 0.53
SMPD1-205ENST00000531303 C2orf74A8MZ97 194 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 PRAMEF4O60810 478 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 CRCPO75575 148 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 OR4F21O95013 312 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 OTCP00480 354 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 KITP10721 976 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 CKMT1AP12532 417 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 GNAZP19086 355 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 VARSP26640 1264 aaKnown RBP18.36■□□□□ 0.53
SMPD1-205ENST00000531303 SERPINB5P36952 375 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 GPR3P46089 330 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 SEC24CP53992 1094 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 ERVPABLB-1P60509 514 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 NAA20P61599 178 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 NHLH1Q02575 133 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 SLC14A1Q13336 389 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 KIR2DS3Q14952 304 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 PRAMEF9Q5VWM5 478 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 NAXDQ8IW45 347 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 LRRC34Q8IZ02 419 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 ZNF781Q8N8C0 355 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 OR4F6Q8NGB9 312 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 OR6C4Q8NGE1 309 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 IFI44Q8TCB0 444 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 AGAP11Q8TF27 550 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 PRR11Q96HE9 360 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-205ENST00000531303 PPM1MQ96MI6 270 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 OR2A14Q96R47 310 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 ZNF382Q96SR6 550 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 ILKAPQ9H0C8 392 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-205ENST00000531303 SYNDIG1Q9H7V2 258 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 MRPS30Q9NP92 439 aaKnown RBP18.36■□□□□ 0.53
SMPD1-205ENST00000531303 PNPOQ9NVS9 261 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 FTSJ1Q9UET6 329 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 MARCOQ9UEW3 520 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-205ENST00000531303 ZDHHC2Q9UIJ5 367 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 RNF11Q9Y3C5 154 aa18.36■□□□□ 0.53
SMPD1-205ENST00000531303 IGHV1OR21-1A0A087WYE8 117 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 EME2A4GXA9 379 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-205ENST00000531303 H7BY64 318 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 CAPZBP47756 277 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 DUSP3P51452 185 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-205ENST00000531303 EPHA4P54764 986 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 MEF2AQ02078 507 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-205ENST00000531303 PRDX1Q06830 199 aaKnown RBP18.35■□□□□ 0.53
SMPD1-205ENST00000531303 SF3A3Q12874 501 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMPD1-205ENST00000531303 TRAF3Q13114 568 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 LETMD1Q6P1Q0 360 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 ADCK2Q7Z695 626 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 SPRED1Q7Z699 444 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 CDYL2Q8N8U2 506 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 OR2L3Q8NG85 312 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 NAT6Q93015 286 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 SLC22A18Q96BI1 424 aa18.35■□□□□ 0.53
SMPD1-205ENST00000531303 PRAP1Q96NZ9 151 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms