RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CMPK1P30085 196 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 EEF1A2Q05639 463 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 MFAP5Q13361 173 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 PRMT9Q6P2P2 845 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 IGFL2Q6UWQ7 119 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 RNF44Q7L0R7 432 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 FJX1Q86VR8 437 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 LRRC6Q86X45 466 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 KBTBD2Q8IY47 623 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 OR4N4Q8N0Y3 316 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 MPP5Q8N3R9 675 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 OR1N1Q8NGS0 311 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 FAR1Q8WVX9 515 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 PEX13Q92968 403 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 ZNF285Q96NJ3 590 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 BARD1Q99728 777 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 ZFYVE21Q9BQ24 234 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 SPATA7Q9P0W8 599 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 PTGFRNQ9P2B2 879 aa15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 STOX2Q9P2F5 926 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-204ENST00000530996 FFAR3O14843 346 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 GPR42O15529 346 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 PRPF4O43172 522 aaKnown RBP eCLIP15.09■□□□□ 0.014e-7■□□□□ 10.7
CHMP4A-204ENST00000530996 ZG16O60844 167 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 MED26O95402 600 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 ONECUT2O95948 504 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 ZSCAN5DPP0CG00 497 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 CXCR2P25025 360 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 RPA3P35244 121 aaPredicted RBP15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 Q0VFX4 171 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 FAAH2Q6GMR7 532 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 GSTA5Q7RTV2 222 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 SRRM1Q8IYB3 904 aaKnown RBP15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 SIRT6Q8N6T7 355 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 C10orf90Q96M02 699 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 DPH7Q9BTV6 452 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 MRPS30Q9NP92 439 aaKnown RBP15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 ABCF3Q9NUQ8 709 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 TRPC4Q9UBN4 977 aa15.09■□□□□ 0.01
CHMP4A-204ENST00000530996 VSTM2BA6NLU5 285 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 E5RI56 91 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 PFDN6O15212 129 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 ANXA5P08758 320 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 RPS3P23396 243 aaKnown RBP eCLIP15.08■□□□□ 0
CHMP4A-204ENST00000530996 FMO4P31512 558 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 VWA2Q5GFL6 755 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 RNF187Q5TA31 235 aaPredicted RBP15.08■□□□□ 0
CHMP4A-204ENST00000530996 C1QL3Q5VWW1 255 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 MRNIPQ6NTE8 343 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 ADCK2Q7Z695 626 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 SDCCAG8Q86SQ7 713 aaPredicted RBP15.08■□□□□ 0
CHMP4A-204ENST00000530996 CSNK1A1LQ8N752 337 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 CATSPER1Q8NEC5 780 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 BRIX1Q8TDN6 353 aaKnown RBP15.08■□□□□ 0
CHMP4A-204ENST00000530996 MARVELD3Q96A59 401 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 IL22Q9GZX6 179 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.08■□□□□ 0
CHMP4A-204ENST00000530996 P2RY12Q9H244 342 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 C14orf105Q9NVL8 296 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 BFARQ9NZS9 450 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 CDC14AQ9UNH5 594 aa15.08■□□□□ 0
CHMP4A-204ENST00000530996 PCM1Q15154 2024 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 SEC16AO15027 2179 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 PRSS44E7EML9 344 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 PRICKLE3O43900 615 aaPredicted RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 NIPSNAP2O75323 286 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 JRKO75564 520 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 KLHL18O94889 574 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 VAPBO95292 243 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 F10P00742 488 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 HEXBP07686 556 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 NMBRP28336 390 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 TNFRSF8P28908 595 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 TERF1P54274 439 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 EMP2P54851 167 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 FASTKQ14296 549 aaKnown RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 ZRSR2Q15696 482 aaKnown RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 CTSL3PQ5NE16 218 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 SUSD1Q6UWL2 747 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 HMGCLL1Q8TB92 370 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 RERGQ96A58 199 aaPredicted RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 MMABQ96EY8 250 aaPredicted RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 EIF2B3Q9NR50 452 aaKnown RBP15.07■□□□□ 0
CHMP4A-204ENST00000530996 FAM114A2Q9NRY5 505 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 TREX1Q9NSU2 369 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 RIC8BQ9NVN3 520 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 PLA2G3Q9NZ20 509 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 TAC3Q9UHF0 121 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 GUCA1BQ9UMX6 200 aa15.07■□□□□ 0
CHMP4A-204ENST00000530996 TRAV17A0A0B4J275 112 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 A0A1B0GUH1 482 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 A0A1W2PPV9 198 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 OR2A25A4D2G3 310 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 ARHGEF33A8MVX0 844 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 IDSB3KWA1 339 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 GOLGA8KD6RF30 607 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 H0YGG7 62 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 H3BMM5 538 aa15.06■□□□□ 0
CHMP4A-204ENST00000530996 GOLGA8TH3BQL2 631 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms