RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	MAGEB3	O15480	346 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	GPR39	O43194	453 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	VPS26A	O75436	327 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	RHOBTB1	O94844	696 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	CDK14	O94921	469 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	MATN4	O95460	622 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	ALDOC	P09972	364 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PSMA4	P25789	261 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	CCT8	P50990	548 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PFN3	P60673	137 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	RACK1	P63244	317 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	UGT3A2	Q3SY77	523 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	LAYN	Q6UX15	382 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	ABI3BP	Q7Z7G0	1075 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	CLYBL	Q8N0X4	340 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PAPD5	Q8NDF8	572 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TSPEAR	Q8WU66	669 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	HSPA12B	Q96MM6	686 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TUBA1C	Q9BQE3	449 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	AARSD1	Q9BTE6	412 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	UNK	Q9C0B0	810 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TBC1D23	Q9NUY8	699 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	GID8	Q9NWU2	228 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	MAP10	Q9P2G4	905 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	KLHL42	Q9P2K6	505 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TMPRSS11E	Q9UL52	423 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	VWA7	Q9Y334	891 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	HEMK1	Q9Y5R4	338 aa	Predicted RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	FXYD1	O00168	92 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TNFRSF10C	O14798	259 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	ACOX3	O15254	700 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	RAD51B	O15315	384 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	FGF4	P08620	206 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PRSS56	P0CW18	603 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	CAPG	P40121	348 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	DMWD	Q09019	674 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	NFATC4	Q14934	902 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	ANGPT1	Q15389	498 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	BCL7A	Q4VC05	210 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	UNC50	Q53HI1	259 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	HECTD2	Q5U5R9	776 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	ABRAXAS1	Q6UWZ7	409 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	SLC15A3	Q8IY34	581 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	FRMD1	Q8N878	549 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	TRPV3	Q8NET8	790 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	OR9I1	Q8NGQ6	314 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PNPT1	Q8TCS8	783 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	DNASE2B	Q8WZ79	361 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	FUBP1	Q96AE4	644 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PRRX2	Q99811	253 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	CXorf21	Q9HAI6	301 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	PALMD	Q9NP74	551 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	FZD3	Q9NPG1	666 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	GMPR2	Q9P2T1	348 aa	Known RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	SUSD2	Q9UGT4	822 aa		14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	14.17	□□□□□ -0.14
NR1H3-231	ENST00000529540	BDP1	A6H8Y1	2624 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540		H3BMQ9	156 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	OR1I1	O60431	355 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	INHBB	P09529	407 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	GFAP	P14136	432 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	GNS	P15586	552 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZNF12	P17014	697 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	FMO4	P31512	558 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	PRLHR	P49683	370 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	C16orf72	Q14CZ0	275 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZNF829	Q3KNS6	432 aa	Predicted RBP	14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	TTLL9	Q3SXZ7	439 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZNF789	Q5FWF6	425 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	PMS2CL	Q68D20	193 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZC3H14	Q6PJT7	736 aa	Known RBP	14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	GCNT7	Q6ZNI0	430 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	USP51	Q70EK9	711 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	MIER2	Q8N344	545 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZBTB44	Q8NCP5	570 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	TBC1D15	Q8TC07	691 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	FAM110B	Q8TC76	370 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	COG8	Q96MW5	612 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	BOC	Q9BWV1	1114 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	COL25A1	Q9BXS0	654 aa	Predicted RBP	14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	SYTL2	Q9HCH5	934 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	CMTM6	Q9NX76	183 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	INVS	Q9Y283	1065 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	OR1A2	Q9Y585	309 aa		14.16	□□□□□ -0.14
NR1H3-231	ENST00000529540	NR5A2	O00482	541 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	ARPC2	O15144	300 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	CLOCK	O15516	846 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	GALR2	O43603	387 aa	Predicted RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	NUAK1	O60285	661 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	KCNJ13	O60928	360 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	ATE1	O95260	518 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	CPNE6	O95741	557 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	GNAO1	P09471	354 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	UMPS	P11172	480 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	JUNB	P17275	347 aa	Predicted RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	CHRM3	P20309	590 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	BCKDHB	P21953	392 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	FDXR	P22570	491 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	CD38	P28907	300 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms