RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MCF2P10911 925 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 FGF3P11487 239 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 FCGR1AP12314 374 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ACADLP28330 430 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 OR1D2P34982 312 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 HOXD13P35453 343 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 PSMB10P40306 273 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 AIMP2Q13155 320 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 KEAP1Q14145 624 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 DHX34Q14147 1143 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 KYAT1Q16773 422 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 EIF2S3LQ2VIR3 472 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 PCGF3Q3KNV8 242 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 LIN9Q5TKA1 542 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ATF7IP2Q5U623 682 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 FAM205BPQ63HN1 556 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 FRG2Q64ET8 278 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 TYW3Q6IPR3 259 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 LCN10Q6JVE6 187 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 C1orf186Q6ZWK4 172 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 IKBIPQ70UQ0 350 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 NRROSQ86YC3 692 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 MAML2Q8IZL2 1156 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 DAW1Q8N136 415 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 WDTC1Q8N5D0 677 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ZBTB44Q8NCP5 570 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 SPATA22Q8NHS9 363 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 TRPC4APQ8TEL6 797 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 DNASE1L2Q92874 299 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 FGF14Q92915 247 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ELSPBP1Q96BH3 223 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 C8orf76Q96K31 380 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 CCDC94Q9BW85 323 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 APOL6Q9BWW8 343 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 GPR88Q9GZN0 384 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 RANGRFQ9HD47 186 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 CNGB3Q9NQW8 809 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 SEPT11Q9NVA2 429 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 UBA2Q9UBT2 640 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 LRWD1Q9UFC0 647 aa4.63□□□□□ -1.67
CSDE1-212ENST00000529046 CORO1CQ9ULV4 474 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 NOL7Q9UMY1 257 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ATXN2Q99700 1313 aaKnown RBP4.63□□□□□ -1.67
CSDE1-212ENST00000529046 ARID2Q68CP9 1835 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 IGLV5-37A0A075B6J1 123 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CASTOR2A6NHX0 329 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 JAK2O60674 1132 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 NDUFS3O75489 264 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 JRKO75564 520 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SLC25A12O75746 678 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 PAPSS2O95340 614 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SRCP12931 536 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CYP3A5P20815 502 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 NFKBIAP25963 317 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 STX2P32856 288 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CCT6AP40227 531 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 GARSP41250 739 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 DRG2P55039 364 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 HNRNPH2P55795 449 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 ARF3P61204 181 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 PRAMEP78395 509 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 MRPS34P82930 218 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 ARF1P84077 181 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 GOLGA8DPQ0D2H9 430 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SMARCB1Q12824 385 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 DMP1Q13316 513 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 MLF2Q15773 248 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 ZBTB6Q15916 424 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 MEA1Q16626 185 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 ASTE1Q2TB18 679 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 RILPL1Q5EBL4 403 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 KRT79Q5XKE5 535 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 NADSYN1Q6IA69 706 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 KLHL35Q6PF15 583 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 PRSS55Q6UWB4 352 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 ZNF852Q6ZMS4 543 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 KRBA2Q6ZNG9 492 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CFAP77Q6ZQR2 320 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CACNA2D4Q7Z3S7 1137 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CDR2LQ86X02 465 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CEP57Q86XR8 500 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 CD302Q8IX05 232 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 PGBD5Q8N414 524 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SYT2Q8N9I0 419 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SUMF1Q8NBK3 374 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 APPL2Q8NEU8 664 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 SPATA3Q8NHX4 192 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 DEPDC1BQ8WUY9 529 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 POMGNT1Q8WZA1 660 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 MSANTD3Q96H12 275 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 PGAM5Q96HS1 289 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 B3GALT6Q96L58 329 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 AK8Q96MA6 479 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 OR2A14Q96R47 310 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 FIZ1Q96SL8 496 aa4.62□□□□□ -1.67
CSDE1-212ENST00000529046 RPP25Q9BUL9 199 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 DDX19AQ9NUU7 478 aaKnown RBP4.62□□□□□ -1.67
CSDE1-212ENST00000529046 LARSQ9P2J5 1176 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms