RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 CFAP61Q8NHU2 1237 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 MAGEC3Q8TD91 643 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 RAD51AP1Q96B01 352 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 MFRPQ9BY79 579 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 PHACTR1Q9C0D0 580 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 TSPYL1Q9H0U9 437 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 P2RY12Q9H244 342 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 SLC26A1Q9H2B4 701 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 ATP13A2Q9NQ11 1180 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 FAM114A2Q9NRY5 505 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 P4HTMQ9NXG6 502 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 ZC3H7BQ9UGR2 993 aaKnown RBP10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 GNPTGQ9UJJ9 305 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 SLC39A10Q9ULF5 831 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 TEX264Q9Y6I9 313 aa10.66□□□□□ -0.7
AMBRA1-204ENST00000526545 IQCF5A8MTL0 148 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 ESPNB1AK53 854 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 TCP11X1B4DZS4 312 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 H3BMM5 538 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 AGPSO00116 658 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 DSCR3O14972 297 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 CTSBP07858 339 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 UMODP07911 640 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 MMP11P24347 488 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 CCNFP41002 786 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 ELK3P41970 407 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PLTPP55058 493 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PDIA2Q13087 525 aaKnown RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 AIMP2Q13155 320 aaKnown RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 RAPSNQ13702 412 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 FRG1Q14331 258 aaKnown RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 GRM7Q14831 915 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PLEKHN1Q494U1 663 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 FIGLAQ6QHK4 219 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 TTLL10Q6ZVT0 673 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 OTOAQ7RTW8 1153 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PPP1R32Q7Z5V6 425 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PALM2Q8IXS6 379 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 HMGCLL1Q8TB92 370 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 SSC4DQ8WTU2 575 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 PYROXD1Q8WU10 500 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 VPS50Q96JG6 964 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 FOPNLQ96NB1 174 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 ZNF285Q96NJ3 590 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 ZNF552Q9H707 407 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 C20orf96Q9NUD7 363 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 GRHL1Q9NZI5 618 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 NXT1Q9UKK6 140 aaKnown RBP10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 KLK4Q9Y5K2 254 aa10.65□□□□□ -0.7
AMBRA1-204ENST00000526545 ZCWPW2A0A1B0GU75 182 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 FITM1A5D6W6 292 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 E7ESA3 106 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 TP73O15350 636 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 PRICKLE3O43900 615 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 CNOT3O75175 753 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 C1orf105O95561 183 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 DDAH2O95865 285 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ITGAXP20702 1163 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ARNTP27540 789 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ADARP55265 1226 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 SLC7A5Q01650 507 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 GUCY2DQ02846 1103 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 CRYMQ14894 314 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 SLC9A5Q14940 896 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 NAA25Q14CX7 972 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 C4orf17Q53FE4 359 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 FCRL6Q6DN72 434 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 LDB1Q86U70 411 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 CILP2Q8IUL8 1156 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 AGGF1Q8N302 714 aaeCLIP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ZADH2Q8N4Q0 377 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 C2orf73Q8N5S3 287 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 TTC29Q8NA56 475 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 LKAAEAR1Q8TD35 194 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 SNRNP40Q96DI7 357 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 SELENOSQ9BQE4 189 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 FAM167BQ9BTA0 163 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 ILKAPQ9H0C8 392 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 SLC22A11Q9NSA0 550 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 CUTCQ9NTM9 273 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 MARCH4Q9P2E8 410 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 MAP10Q9P2G4 905 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 KLHL20Q9Y2M5 609 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 COMMD10Q9Y6G5 202 aa10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 TNRC6AQ8NDV7 1962 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 USP9YO00507 2555 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-204ENST00000526545 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
AMBRA1-204ENST00000526545 GOLGA8TH3BQL2 631 aa10.63□□□□□ -0.71
AMBRA1-204ENST00000526545 MATN4O95460 622 aa10.63□□□□□ -0.71
AMBRA1-204ENST00000526545 ESR1P03372 595 aa10.63□□□□□ -0.71
AMBRA1-204ENST00000526545 GSTA2P09210 222 aa10.63□□□□□ -0.71
AMBRA1-204ENST00000526545 ATP5DP30049 168 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms