RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 OR10G7Q8NGN6 311 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 DHX58Q96C10 678 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 KCNK15Q9H427 330 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 CRYL1Q9Y2S2 319 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 LRRFIP2Q9Y608 721 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 MYO1GB0I1T2 1018 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 E9PAM4 449 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 CREG1O75629 220 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 RNASEH2AO75792 299 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 C9P02748 559 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 IGKV3-11P04433 115 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 ATP1A3P13637 1013 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 GABRB1P18505 474 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 PTPN3P26045 913 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 ELAVL4P26378 380 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 NDUFV3P56181 108 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 PPIAP62937 165 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 IGLV3-21P80748 117 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 MYL7Q01449 175 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 Q1RN00 199 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 LDB1Q86U70 411 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 C4orf32Q8N8J7 132 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 EXD1Q8NHP7 514 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 NEK1Q96PY6 1258 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 CCDC3Q9BQI4 270 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 TMX4Q9H1E5 349 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 ASB8Q9H765 288 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 JMJD4Q9H9V9 463 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 TBC1D17Q9HA65 648 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 GKN1Q9NS71 199 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 IL17CQ9P0M4 197 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 PIAS3Q9Y6X2 628 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 POGZQ7Z3K3 1410 aa1.89□□□□□ -2.11
ECHDC1-219ENST00000526299 ANKUB1A6NFN9 424 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 LRRC72A6NJI9 287 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 A8MZ25 164 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 HDAC3O15379 428 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 OR10H2O60403 315 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 TSPAN1O60635 241 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 NXPH4O95158 308 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 CLTBP09497 229 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 OR3A2P47893 321 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 DNA2P51530 1060 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 PRELPP51888 382 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 SGCGQ13326 291 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 TSTQ16762 297 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 CA9Q16790 459 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 C11orf63Q6NUN7 778 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 TMCO3Q6UWJ1 677 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 LRRC59Q96AG4 307 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 NUS1Q96E22 293 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 THOC1Q96FV9 657 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 C4orf45Q96LM5 186 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 FAM20AQ96MK3 541 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 CCDC28BQ9BUN5 200 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 SAGE1Q9NXZ1 904 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 GTF3C4Q9UKN8 822 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 SELENOKQ9Y6D0 94 aa1.88□□□□□ -2.11
ECHDC1-219ENST00000526299 IGKV6-21A0A0C4DH24 114 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 K7ENM7 598 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PDHXO00330 501 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 IFRD1O00458 451 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 TRAFD1O14545 582 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PRAMEF11O60813 436 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PRDM1O75626 825 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 RTN3O95197 1032 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 OR2C1O95371 312 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 DDX58O95786 925 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 OR2T7P0C7T2 308 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 FAM200BP0CF97 657 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PSMA4P25789 261 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 CHRNA3P32297 505 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 CDH8P55286 799 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 UGT3A2Q3SY77 523 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 SYT14P1Q58G82 188 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 LEMD1Q68G75 181 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 TMEM154Q6P9G4 183 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 TMPRSS11BQ86T26 416 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 LGI2Q8N0V4 545 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 FBXO39Q8N4B4 442 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 SPPL2AQ8TCT8 520 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 SSMEM1Q8WWF3 244 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PIGBQ92521 554 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 PGAM5Q96HS1 289 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 MTMR12Q9C0I1 747 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 TLE6Q9H808 572 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 UBN1Q9NPG3 1134 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 DIAPH3Q9NSV4 1193 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 ADAM22Q9P0K1 906 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 LUZP4Q9P127 313 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 NME7Q9Y5B8 376 aa1.87□□□□□ -2.11
ECHDC1-219ENST00000526299 IGHV3-38A0A0C4DH36 116 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 TRBV4-1A0A0J9YWV2 114 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 MEIS2O14770 477 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 MITFO75030 526 aaPredicted RBP1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 RB1P06400 928 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 VPREB1P12018 145 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 CRYMQ14894 314 aa1.86□□□□□ -2.11
ECHDC1-219ENST00000526299 WSCD1Q658N2 575 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms