RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 VSTM2BA6NLU5 285 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 H7C0S8 307 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 C19orf84I3L1E1 186 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PCDH17O14917 1159 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 KRT38O76015 456 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 TJP3O95049 919 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 WDPCPO95876 746 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 HPP00738 406 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ALBP02768 609 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 HEXBP07686 556 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PRR35P0CG20 571 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ITGAMP11215 1152 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 COX6B1P14854 86 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ETS1P14921 441 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 TCP1P17987 556 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 FBLP22087 321 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 CXCR2P25025 360 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 GCGRP47871 477 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 TERF1P54274 439 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 KRTAP10-9P60411 292 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 MAT1AQ00266 395 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 ITIH4Q14624 930 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 CDSNQ15517 529 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 C3AR1Q16581 482 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 FAM214AQ32MH5 1076 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 FASTKD1Q53R41 847 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 DNAJC21Q5F1R6 531 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 SEL1L2Q5TEA6 688 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ATG9BQ674R7 924 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 KCTD11Q693B1 232 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PTRHD1Q6GMV3 140 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 TTC23LQ6PF05 361 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 CNSTQ6PJW8 725 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 SUSD1Q6UWL2 747 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 CES3Q6UWW8 571 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 NDUFAF7Q7L592 441 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 OR2L8Q8NGY9 312 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 OR4L1Q8NH43 312 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PSMF1Q92530 271 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 NR4A3Q92570 626 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ALG3Q92685 438 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 RELTQ969Z4 430 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 FKBP10Q96AY3 582 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 LRRC45Q96CN5 670 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 CCDC120Q96HB5 630 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 CABS1Q96KC9 395 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 LURAP1Q96LR2 239 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 SLX1AQ9BQ83 275 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 TMEM121Q9BTD3 319 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 LRRC40Q9H9A6 602 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 ETNK1Q9HBU6 452 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 KLHL1Q9NR64 748 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 INTS7Q9NVH2 962 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 TRMT1Q9NXH9 659 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 ANKRD10Q9NXR5 420 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 STMN3Q9NZ72 180 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 RNF14Q9UBS8 474 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 SEC14L3Q9UDX4 400 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 FER1L5A0AVI2 2057 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 DOCK10Q96BY6 2186 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PKDREJQ9NTG1 2253 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 A0A0A6YYC8 382 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 TRAV17A0A0B4J275 112 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 A0A0U1RQJ8 604 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 CTAGE9A4FU28 777 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 MROH6A6NGR9 719 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 IDSB3KWA1 339 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 H0YGG7 62 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 I3L1I5 382 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 RASGRF2O14827 1237 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 PSMD3O43242 534 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 PRICKLE3O43900 615 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 KDM1AO60341 852 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 SRPX2O60687 465 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 RASAL1O95294 804 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 C1orf105O95561 183 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 FTCDO95954 541 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 S1PR4O95977 384 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 IFNB1P01574 187 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 APOA4P06727 396 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 F7P08709 466 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 GSTM1P09488 218 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 ERVK-10P10266 1014 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 ESRRAP11474 423 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 COX6A1P12074 109 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 AOAHP28039 575 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 CARSP49589 748 aaKnown RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 TNFSF10P50591 281 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 TDGF1P3P51864 188 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 ARF3P61204 181 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 GNG11P61952 73 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 PRAMEP78395 509 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 CRADDP78560 199 aa6.26□□□□□ -1.41
CD44-221ENST00000526000 PLOD1Q02809 727 aaPredicted RBP6.26□□□□□ -1.41
CD44-221ENST00000526000 GSTM4Q03013 218 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms