RNA–Protein interactions for RNA: ENST00000525939.1

ABCA7-208, Transcript of ATP binding cassette subfamily A member 7, human

TSL 3

Gene ABCA7, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-208	ENST00000525939	GP5	P40197	560 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	AP1S2	P56377	157 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	TAS2R39	P59534	338 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	ABAT	P80404	500 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	NAB1	Q13506	487 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	SOWAHC	Q53LP3	525 aa	Predicted RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	TCTE1	Q5JU00	501 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	SUSD1	Q6UWL2	747 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	SYTL1	Q8IYJ3	562 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	NKAP	Q8N5F7	415 aa	Known RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	PROKR1	Q8TCW9	393 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	CLIP3	Q96DZ5	547 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	RNF31	Q96EP0	1072 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	CATSPER2	Q96P56	530 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	BBC3	Q96PG8	261 aa	Predicted RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	RBBP8	Q99708	897 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	SPRTN	Q9H040	489 aa	Predicted RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	STOX2	Q9P2F5	926 aa	Predicted RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	NOVA2	Q9UNW9	492 aa	Known RBP	21.32	■■□□□ 1
ABCA7-208	ENST00000525939	CCDC88C	Q9P219	2028 aa		21.32	■■□□□ 1
ABCA7-208	ENST00000525939	ATRX	P46100	2492 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	CTSV	O60911	334 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	WISP3	O95389	354 aa	Predicted RBP	21.31	■■□□□ 1
ABCA7-208	ENST00000525939	RAB40AL	P0C0E4	278 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	YOD1	Q5VVQ6	348 aa	Predicted RBP	21.31	■■□□□ 1
ABCA7-208	ENST00000525939	ICE2	Q659A1	982 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	ZNF425	Q6IV72	752 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	RNF44	Q7L0R7	432 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	GPR22	Q99680	433 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	PLCD4	Q9BRC7	762 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	DPH7	Q9BTV6	452 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	SLC6A20	Q9NP91	592 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	MRPS30	Q9NP92	439 aa	Known RBP	21.31	■■□□□ 1
ABCA7-208	ENST00000525939	TXNDC16	Q9P2K2	825 aa		21.31	■■□□□ 1
ABCA7-208	ENST00000525939	MTRF1L	Q9UGC7	380 aa	Known RBP	21.31	■■□□□ 1
ABCA7-208	ENST00000525939	IGKV1-8	A0A0C4DH67	115 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	FITM1	A5D6W6	292 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	PIAS1	O75925	651 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	21.3	■■□□□ 1
ABCA7-208	ENST00000525939	HIST1H2AD	P20671	130 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	CCND1	P24385	295 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	PGGT1B	P53609	377 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	CDC20	Q12834	499 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	PHKG1	Q16816	387 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	KBTBD12	Q3ZCT8	623 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	FAM199X	Q6PEV8	388 aa	Predicted RBP	21.3	■■□□□ 1
ABCA7-208	ENST00000525939	SBSN	Q6UWP8	590 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	CEP97	Q8IW35	865 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	PPFIBP2	Q8ND30	876 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	MR1	Q95460	341 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	HIST1H2AH	Q96KK5	128 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	HIST1H2AJ	Q99878	128 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	H2AFJ	Q9BTM1	129 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	ACAT2	Q9BWD1	397 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	SLC7A5P2	Q9GIP4	190 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	PCBD2	Q9H0N5	130 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	CHST8	Q9H2A9	424 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	UTP6	Q9NYH9	597 aa	Known RBP	21.3	■■□□□ 1
ABCA7-208	ENST00000525939	TAC3	Q9UHF0	121 aa		21.3	■■□□□ 1
ABCA7-208	ENST00000525939	COL6A6	A6NMZ7	2263 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	NKX2-8	O15522	239 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	CREG1	O75629	220 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	CAPN1	P07384	714 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	CTSB	P07858	339 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	HRH2	P25021	359 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	PTPN4	P29074	926 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	ECHS1	P30084	290 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	ARSF	P54793	590 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	RPS15	P62841	145 aa	Known RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	YBX1	P67809	324 aa	Known RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	CYP4F2	P78329	520 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	GRTP1	Q5TC63	336 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	PAQR7	Q86WK9	346 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	FBF1	Q8TES7	1133 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	TSPAN17	Q96FV3	270 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	GBP5	Q96PP8	586 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	ZFYVE21	Q9BQ24	234 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	C17orf62	Q9BQA9	187 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	SELENOS	Q9BQE4	189 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	FUT8	Q9BYC5	575 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	NLN	Q9BYT8	704 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	TRIM54	Q9BYV2	358 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	CCDC177	Q9NQR7	707 aa	Predicted RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	SNX7	Q9UNH6	387 aa		21.29	■■□□□ 1
ABCA7-208	ENST00000525939	FARSA	Q9Y285	508 aa	Known RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	MTO1	Q9Y2Z2	717 aa	Known RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	MRPS18B	Q9Y676	258 aa	Known RBP	21.29	■■□□□ 1
ABCA7-208	ENST00000525939	ONECUT2	O95948	504 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	SPR	P35270	261 aa	Predicted RBP	21.28	■■□□□ 1
ABCA7-208	ENST00000525939	TBPL1	P62380	186 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	ZKSCAN8	Q15776	578 aa	Predicted RBP	21.28	■■□□□ 1
ABCA7-208	ENST00000525939	TBR1	Q16650	682 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	PPP1R3A	Q16821	1122 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	LINC00303	Q3SY05	128 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	LCN10	Q6JVE6	187 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	FBXO42	Q6P3S6	717 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	AGTRAP	Q6RW13	159 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	SYVN1	Q86TM6	617 aa		21.28	■■□□□ 1
ABCA7-208	ENST00000525939	ZNF655	Q8N720	491 aa	Predicted RBP	21.28	■■□□□ 1
ABCA7-208	ENST00000525939	NDC1	Q9BTX1	674 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms