RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 AFAP1Q8N556 730 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 ZNF614Q8N883 585 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 SLC35B4Q969S0 331 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 NSUN4Q96CB9 384 aaKnown RBP3.47□□□□□ -1.85
CD44-217ENST00000525348 DHTKD1Q96HY7 919 aaPredicted RBP3.47□□□□□ -1.85
CD44-217ENST00000525348 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
CD44-217ENST00000525348 C18orf12Q96KH6 178 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 CABLES2Q9BTV7 478 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 CAPS2Q9BXY5 557 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 TRIM15Q9C019 465 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 CCDC68Q9H2F9 335 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 ZNF446Q9NWS9 450 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 POLKQ9UBT6 870 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 LRWD1Q9UFC0 647 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 ADCY10Q96PN6 1610 aa3.47□□□□□ -1.85
CD44-217ENST00000525348 MAGI1Q96QZ7 1491 aaPredicted RBP3.47□□□□□ -1.85
CD44-217ENST00000525348 SOGA1O94964 1423 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 WDR97A6NE52 1622 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 GPR75-ASB3A0A0A6YYF3 556 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 hCG_1807616A0A1W2PRN6 198 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 KIAA0754O94854 1291 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 CLDN1O95832 211 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 CSH1P0DML2 217 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 CSH2P0DML3 217 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SFTPCP11686 197 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 KIF5BP33176 963 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SH3BGRP55822 239 aaPredicted RBP3.46□□□□□ -1.86
CD44-217ENST00000525348 LMO4P61968 165 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 PTPN14Q15678 1187 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 KBTBD12Q3ZCT8 623 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SLC25A53Q5H9E4 307 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 TMEM211Q6ICI0 200 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 GALNT17Q6IS24 598 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 ZNF613Q6PF04 617 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 PEX5LQ8IYB4 626 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 ZNF595Q8IYB9 648 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 CFAP206Q8IYR0 622 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 NPEPL1Q8NDH3 523 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 ANKRD20A12PQ8NF67 263 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 OR11H4Q8NGC9 324 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 ERMNQ8TAM6 284 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 DYRK2Q92630 601 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SLC22A18Q96BI1 424 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SDF4Q9BRK5 362 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 MCRIP2Q9BUT9 160 aaKnown RBP3.46□□□□□ -1.86
CD44-217ENST00000525348 UTP14AQ9BVJ6 771 aaKnown RBP3.46□□□□□ -1.86
CD44-217ENST00000525348 PANK2Q9BZ23 570 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SHARPINQ9H0F6 387 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 Q9N2K0 584 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 SH3GLB2Q9NR46 395 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 TBC1D22BQ9NU19 505 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 UBAP1Q9NZ09 502 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 DAPK2Q9UIK4 370 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 VPS28Q9UK41 221 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 GRIP1Q9Y3R0 1128 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 GRIN2BQ13224 1484 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 PCNX3Q9H6A9 2034 aa3.46□□□□□ -1.86
CD44-217ENST00000525348 EVC2Q86UK5 1308 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PCDH11YQ9BZA8 1340 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 TOP2BQ02880 1626 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 A0A1B0GUL7 405 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 FIBPO43427 364 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 RNASEH1O60930 286 aaKnown RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 FRAT2O75474 233 aaPredicted RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 REC8O95072 547 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 OR2T7P0C7T2 308 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 IGHV4-31P0DP07 118 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 CD9P21926 228 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 CA6P23280 308 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PTPN3P26045 913 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 SLC6A6P31641 620 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 CASP2P42575 452 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PDX1P52945 283 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 KRTAP10-3P60369 221 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 HNRNPKP61978 463 aaKnown RBP eCLIP3.45□□□□□ -1.86
CD44-217ENST00000525348 SQLEQ14534 574 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 SLMAPQ14BN4 828 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 CFAP58Q5T655 872 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 RNASEH2BQ5TBB1 312 aaKnown RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 STXBP4Q6ZWJ1 553 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 LACC1Q8IV20 430 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 GUF1Q8N442 669 aaKnown RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 TEX9Q8N6V9 391 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 BMPERQ8N8U9 685 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PPFIBP2Q8ND30 876 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 SUN5Q8TC36 379 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PHLDA1Q8WV24 401 aaPredicted RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 SUSD6Q92537 303 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 LPGAT1Q92604 370 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 SH3GL1Q99961 368 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PIGQQ9BRB3 760 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 NUP85Q9BW27 656 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 LRRCC1Q9C099 1032 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 P2RY12Q9H244 342 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 MMP27Q9H306 513 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 OSGEPL1Q9H4B0 414 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 CACNG4Q9UBN1 327 aa3.45□□□□□ -1.86
CD44-217ENST00000525348 PA2G4Q9UQ80 394 aaKnown RBP3.45□□□□□ -1.86
CD44-217ENST00000525348 TTLL3Q9Y4R7 772 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms