RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 NDUFB10O96000 172 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 KRT6AP02538 564 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 MT-ND1P03886 318 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ICAM1P05362 532 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 JUNP05412 331 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 KRT19P08727 400 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 STAG3L1P0CL83 205 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 STAG3L2P0CL84 134 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 VSIG10L2P0DP72 767 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 FCER1AP12319 257 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ITGALP20701 1170 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PTNP21246 168 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PAICSP22234 425 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 TUBG1P23258 451 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 AXLP30530 894 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 RRM2P31350 389 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ADMP35318 185 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 RORAP35398 523 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 DLSTP36957 453 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SLC1A6P48664 564 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 RGS7P49802 495 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ASCL1P50553 236 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PLCD1P51178 756 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 VAV2P52735 878 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 NCKAP1LP55160 1127 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 CLDN2P57739 230 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SELENOVP59797 346 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 YWHAEP62258 255 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 HSD11B2P80365 405 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 BNC1Q01954 994 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 MRPL49Q13405 166 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 LY6KQ17RY6 165 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ADPRMQ3LIE5 342 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TMEM119Q4V9L6 283 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 FAM98BQ52LJ0 330 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 ZNF311Q5JNZ3 666 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 RABGAP1LQ5R372 815 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 C6orf141Q5SZD1 244 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 WLSQ5T9L3 541 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ATF7IP2Q5U623 682 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ANKS6Q68DC2 871 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SFRP4Q6FHJ7 346 aaPredicted RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 PAQR3Q6TCH7 311 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ETV3LQ6ZN32 361 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TRILQ7L0X0 811 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ADGRD2Q7Z7M1 963 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TMEM173Q86WV6 379 aaPredicted RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 DTX1Q86Y01 620 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 KRTAP1-3Q8IUG1 177 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 FUKQ8N0W3 1084 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 LRRC75A-AS1Q8N1F1 130 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ANKRD13CQ8N6S4 541 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ASCC1Q8N9N2 400 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 EXD1Q8NHP7 514 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 CD300LFQ8TDQ1 290 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 OSCP1Q8WVF1 389 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PIBF1Q8WXW3 757 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TRIB2Q92519 343 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PRRC1Q96M27 445 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 FYTTD1Q96QD9 318 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 TAAR6Q96RI8 345 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TMEM209Q96SK2 561 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 CPNE1Q99829 537 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TMEM47Q9BQJ4 181 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 BBS2Q9BXC9 721 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 NUSAP1Q9BXS6 441 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 FTHL17Q9BXU8 183 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 LRRC19Q9H756 370 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 MED4Q9NPJ6 270 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TUBG2Q9NRH3 451 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TAS2R14Q9NYV8 317 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PDP1Q9P0J1 537 aaPredicted RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ATPIF1Q9UII2 106 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 RBM8AQ9Y5S9 174 aaKnown RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 STRCQ7RTU9 1775 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SCAPERQ9BY12 1400 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 CCDC195A0A1B0GUA6 201 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 ILVBLA1L0T0 632 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 C12orf71A8MTZ7 269 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 B5MCH6 92 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 WASH3PC4AMC7 463 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 ZNF197O14709 1029 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 LSM1O15116 133 aaKnown RBP4.31□□□□□ -1.72
CD44-213ENST00000525209 FLRT2O43155 660 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 AP5Z1O43299 807 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 DFFBO76075 338 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 OR4F21O95013 312 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 STBD1O95210 358 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 CBX6O95503 412 aa4.31□□□□□ -1.72
CD44-213ENST00000525209 SNAI1O95863 264 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms