RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 EFTUD2Q15029 972 aaKnown RBP eCLIP11.77□□□□□ -0.539e-8■□□□□ 9.2
CHKA-203ENST00000525155 ZKSCAN8Q15776 578 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 MROH9Q5TGP6 573 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 LCN10Q6JVE6 187 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 CYHR1Q6ZMK1 362 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 RAPH1Q70E73 1250 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 TBC1D1Q86TI0 1168 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 MREGQ8N565 214 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 MRRFQ96E11 262 aaKnown RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 HIST1H2AHQ96KK5 128 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 SLC30A3Q99726 388 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 HIST1H2AJQ99878 128 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 H2AFJQ9BTM1 129 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 HRASLS2Q9NWW9 162 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 PSMC3IPQ9P2W1 217 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 OR6C74A6NCV1 312 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 OR5K3A6NET4 321 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 C2orf74A8MZ97 194 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 MYO1CO00159 1063 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 RASGRF2O14827 1237 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 MAP3K7O43318 606 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 KATNA1O75449 491 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 RASSF9O75901 435 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 FAM155BO75949 473 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 FKBP9O95302 570 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 NTRK1P04629 796 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 EBLN1P0CF75 366 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 TYK2P29597 1187 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 HSD17B3P37058 310 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 AP1S2P56377 157 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 KIR2DS3Q14952 304 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 RASA2Q15283 850 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHKA-203ENST00000525155 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 ADGRD1Q6QNK2 874 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 UBE2R2Q712K3 238 aaPredicted RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 ADAMTSL2Q86TH1 951 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 OR4E2Q8NGC2 313 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 OR9A1PQ8NGU1 263 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 UHMK1Q8TAS1 419 aaKnown RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 DCAKDQ8WVC6 231 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 ATL1Q8WXF7 558 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 KIAA1143Q96AT1 154 aaPredicted RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 CCDC138Q96M89 665 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 DHRS4Q9BTZ2 278 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 EFHD1Q9BUP0 239 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 TRIM55Q9BYV6 548 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 DERL2Q9GZP9 239 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 LHX9Q9NQ69 397 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 ACOT9Q9Y305 439 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 PCDHGA6Q9Y5G7 932 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
CHKA-203ENST00000525155 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
CHKA-203ENST00000525155 NBPF19A0A087WUL8 3843 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CCDC151A5D8V7 595 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 DNAJB5O75953 348 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 TSPAN12O95859 305 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 NUDT17P0C025 328 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CCDC166P0CW27 439 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 PKLRP30613 574 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 KPNA2P52292 529 aaKnown RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 RPS18P62269 152 aaKnown RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 IFFO1Q0D2I5 559 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 NAA25Q14CX7 972 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 FAM83EQ2M2I3 478 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 KLC3Q6P597 504 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CYB5D1Q6P9G0 228 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 ZNF517Q6ZMY9 492 aaPredicted RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 PIWIL4Q7Z3Z4 852 aaKnown RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 RASGRP3Q8IV61 690 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CEP97Q8IW35 865 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 RIBC1Q8N443 379 aaPredicted RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 D2HGDHQ8N465 521 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 OR2L8Q8NGY9 312 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 HMGCLL1Q8TB92 370 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 ISL2Q96A47 359 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 ROPN1BQ9BZX4 212 aaPredicted RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 EPB41L4BQ9H329 900 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CAB39LQ9H9S4 337 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 ROPN1Q9HAT0 212 aaPredicted RBP11.75□□□□□ -0.53
CHKA-203ENST00000525155 NMRAL1Q9HBL8 299 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 NFS1Q9Y697 457 aa11.75□□□□□ -0.53
CHKA-203ENST00000525155 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms