RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CPSF7Q8N684 471 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 URGCPQ8TCY9 931 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 CA5BP1Q8WTZ4 195 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 PRPF31Q8WWY3 499 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 TFAP2BQ92481 460 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 CAVIN3Q969G5 261 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 FKBP10Q96AY3 582 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 FAM149B1Q96BN6 582 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 TRMT61AQ96FX7 289 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 P2RY11Q96G91 374 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 CCDC34Q96HJ3 373 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 C18orf15Q96N68 181 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 UROC1Q96N76 676 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 SPATA13Q96N96 652 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 RAB3IPQ96QF0 476 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 MAP7D2Q96T17 732 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 CITED2Q99967 270 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 THUMPD3Q9BV44 507 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 NPLQ9BXD5 320 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 HEMGNQ9BXL5 484 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 TRIM7Q9C029 511 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 XPO4Q9C0E2 1151 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 COPS7BQ9H9Q2 264 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 MTMR4Q9NYA4 1195 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 EHD3Q9NZN3 535 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 SELENONQ9NZV5 590 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 MARCH4Q9P2E8 410 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 MKLN1Q9UL63 735 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 NENFQ9UMX5 172 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 PTRH2Q9Y3E5 179 aaKnown RBP3.01□□□□□ -1.93
CSDE1-209ENST00000525132 PCDHB2Q9Y5E7 798 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 CAPN7Q9Y6W3 813 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 MYH1P12882 1939 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 GTF3C1Q12789 2109 aa3.01□□□□□ -1.93
CSDE1-209ENST00000525132 UNC13CQ8NB66 2214 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 LRRC3CA6NJW4 275 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 GLOD5A6NK44 160 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CGB1A6NKQ9 187 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 LDLRAD4O15165 306 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 LIASO43766 372 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TACC1O75410 805 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PSMD10O75832 226 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 SEC31AO94979 1220 aaKnown RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 CHRM2P08172 466 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CHRM4P08173 479 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CCDC175P0C221 793 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 MYBL1P10243 752 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CYP4B1P13584 511 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ZNF37AP17032 561 aaPredicted RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 BMP5P22003 454 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 DGKAP23743 735 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 OXTRP30559 389 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TCF7P36402 384 aaPredicted RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 GP5P40197 560 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PTH2RP49190 550 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 LIG4P49917 911 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 MFAP4P55083 255 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 CEBPZQ03701 1054 aaKnown RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 NIPAL4Q0D2K0 466 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 HNRNPA0Q13151 305 aaKnown RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 SLC18A3Q16572 532 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CYP1B1Q16678 543 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 FAM187BQ17R55 369 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 AP5B1Q2VPB7 878 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TTC31Q49AM3 519 aaPredicted RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 ZNF628Q5EBL2 1059 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ZNF667Q5HYK9 610 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 C6orf52Q5T4I8 152 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 SERTAD4-AS1Q5TG53 156 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ALKBH5Q6P6C2 394 aaKnown RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 GALNT7Q86SF2 657 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CAND1Q86VP6 1230 aaKnown RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 ZNF575Q86XF7 245 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ADGRG3Q86Y34 549 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ELMOD1Q8N336 334 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PI4KAP1Q8N8J0 262 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 LEMD2Q8NC56 503 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 B3GALNT2Q8NCR0 500 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 RAB40AQ8WXH6 277 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 CTHRC1Q96CG8 243 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PGAM5Q96HS1 289 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 FBXL20Q96IG2 436 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TAAR1Q96RJ0 339 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 ACOX2Q99424 681 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TUBB6Q9BUF5 446 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 EFHD1Q9BUP0 239 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 GATA5Q9BWX5 397 aaPredicted RBP3□□□□□ -1.93
CSDE1-209ENST00000525132 TRIM31Q9BZY9 425 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 DNAI2Q9GZS0 605 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 KLK15Q9H2R5 256 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PLEKHF2Q9H8W4 249 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 SAP30LQ9HAJ7 183 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 SCPEP1Q9HB40 452 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 TRIM36Q9NQ86 728 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 PFDN4Q9NQP4 134 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 COQ3Q9NZJ6 369 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 SLC17A6Q9P2U8 582 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 C11orf21Q9P2W6 132 aa3□□□□□ -1.93
CSDE1-209ENST00000525132 HSPB7Q9UBY9 170 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms