RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 SLITRK5O94991 958 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 DDX6P26196 483 aaKnown RBP eCLIP9.9□□□□□ -0.821e-7■■□□□ 13.6
CTNND1-210ENST00000524630 ACVR2AP27037 513 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 RPS3AP61247 264 aaKnown RBP9.9□□□□□ -0.82
CTNND1-210ENST00000524630 DUOXA1Q1HG43 343 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 LRRC73Q5JTD7 316 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-210ENST00000524630 C7orf57Q8NEG2 295 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 OR2L5Q8NG80 312 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 OR10Q1Q8NGQ4 319 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.826e-7■■□□□ 14.4
CTNND1-210ENST00000524630 FATE1Q969F0 183 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 LGR4Q9BXB1 951 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 BCO2Q9BYV7 579 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 CCSER2Q9H7U1 834 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 TCF7L1Q9HCS4 588 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.82
CTNND1-210ENST00000524630 ERN1O75460 977 aaKnown RBP9.9□□□□□ -0.82
CTNND1-210ENST00000524630 RASAL1O95294 804 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 FGF19O95750 216 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 OR4F3Q6IEY1 312 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 TREML1Q86YW5 311 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 DDX1Q92499 740 aaKnown RBP9.9□□□□□ -0.82
CTNND1-210ENST00000524630 MSANTD3Q96H12 275 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 TWNKQ96RR1 684 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 ZSCAN5AQ9BUG6 496 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 IFT27Q9BW83 186 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 GPR88Q9GZN0 384 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
CTNND1-210ENST00000524630 MATN4O95460 622 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 PABPC4LP0CB38 370 aaKnown RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 PCSK2P16519 638 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 CPN2P22792 545 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 CBX5P45973 191 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 SEMG2Q02383 582 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 DPY19L1Q2PZI1 675 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 RAB12Q6IQ22 244 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ZC3H3Q8IXZ2 948 aaKnown RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 FIBCD1Q8N539 461 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ZNF696Q9H7X3 374 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 COLEC10Q9Y6Z7 277 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 SMIM30A4D0T7 59 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 SYN3O14994 580 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 IL7P13232 177 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 DNAJB1P25685 340 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 AVPR1BP47901 424 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ZNF45Q02386 682 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 NOL9Q5SY16 702 aaKnown RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 PLPP4Q5VZY2 271 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 MSANTD2Q6P1R3 559 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ATCAYQ86WG3 371 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 PLD6Q8N2A8 252 aaKnown RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 COQ8AQ8NI60 647 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 LMLNQ96KR4 655 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ZNF285Q96NJ3 590 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 GTPBP2Q9BX10 602 aaKnown RBP9.9□□□□□ -0.83
CTNND1-210ENST00000524630 ZNF350Q9GZX5 532 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 GDAP2Q9NXN4 497 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.83
CTNND1-210ENST00000524630 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 METTL21EPA6NDL7 271 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 DENRO43583 198 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 USP2O75604 605 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 CHRM1P11229 460 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 S100A2P29034 98 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 EIF2S3P41091 472 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 NCBP2P52298 156 aaKnown RBP eCLIP9.89□□□□□ -0.838e-20■□□□□ 11.1
CTNND1-210ENST00000524630 DSC3Q14574 896 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 ZNF548Q8NEK5 533 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 OR5AK3PQ8NH89 298 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 NEK7Q8TDX7 302 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 POLR2J3Q9H1A7 115 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 TIGARQ9NQ88 270 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 CTPS2Q9NRF8 586 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 HCN1O60741 890 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 OR7A10O76100 309 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 PRPS1L1P21108 318 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 GNG2P59768 71 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 RFTN1Q14699 578 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 LBX2Q6XYB7 198 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 TMEM80Q96HE8 168 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 GAL3ST1Q99999 423 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 MRM3Q9HC36 420 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 FLRT1Q9NZU1 646 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 UBQLN2Q9UHD9 624 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 KDM3BQ7LBC6 1761 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 A0A1W2PRB8 838 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 MSCO60682 206 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 POP4O95707 220 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 OPN1SWP03999 348 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 RGPD2P0DJD1 1756 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 LCN1P31025 176 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 CSKP41240 450 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 PAFAH1B3Q15102 231 aaKnown RBP9.89□□□□□ -0.83
CTNND1-210ENST00000524630 ANKDD1AQ495B1 522 aa9.89□□□□□ -0.83
CTNND1-210ENST00000524630 CMPK2Q5EBM0 449 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms