RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 HLA-DQB2P05538 268 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SRPRAP08240 638 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 PET100P0DJ07 73 aa2.53□□□□□ -2
PCM1-222ENST00000524226 GRIA1P42261 906 aa2.53□□□□□ -2
PCM1-222ENST00000524226 GRIA3P42263 894 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ABL2P42684 1182 aa2.53□□□□□ -2
PCM1-222ENST00000524226 YBEYP58557 167 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 TAS2R41P59536 307 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ARF3P61204 181 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 ARF1P84077 181 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 PPP2R2BQ00005 443 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MVKQ03426 396 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RING1Q06587 406 aa2.53□□□□□ -2
PCM1-222ENST00000524226 IL18Q14116 193 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ZNF234Q14588 700 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SF3B4Q15427 424 aaKnown RBP eCLIP2.53□□□□□ -22e-10■■■■■ 35.2
PCM1-222ENST00000524226 SMU1Q2TAY7 513 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PDCD4Q53EL6 469 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 RTP2Q5QGT7 225 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CERCAMQ5T4B2 595 aa2.53□□□□□ -2
PCM1-222ENST00000524226 STEAP4Q687X5 459 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ZNF776Q68DI1 518 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 SHQ1Q6PI26 577 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 PAOXQ6QHF9 649 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CYP2R1Q6VVX0 501 aa2.53□□□□□ -2
PCM1-222ENST00000524226 GRASPQ7Z6J2 395 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 TTC7BQ86TV6 843 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ALYREFQ86V81 257 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 IGDCC3Q8IVU1 814 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RBFAQ8N0V3 343 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SLC44A3Q8N4M1 653 aa2.53□□□□□ -2
PCM1-222ENST00000524226 FBXO30Q8TB52 745 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RAB2BQ8WUD1 216 aa2.53□□□□□ -2
PCM1-222ENST00000524226 LINC01599Q8WXQ3 324 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SGCDQ92629 289 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PPCDCQ96CD2 204 aa2.53□□□□□ -2
PCM1-222ENST00000524226 NXPE2Q96DL1 559 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CLIP3Q96DZ5 547 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PHF21BQ96EK2 531 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SLC47A1Q96FL8 570 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CAMK1GQ96NX5 476 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PKMYT1Q99640 499 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MYOCQ99972 504 aa2.53□□□□□ -2
PCM1-222ENST00000524226 TMEM168Q9H0V1 697 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MAGEH1Q9H213 219 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CCSER2Q9H7U1 834 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ANKRA2Q9H9E1 313 aa2.53□□□□□ -2
PCM1-222ENST00000524226 NMUR1Q9HB89 426 aa2.53□□□□□ -2
PCM1-222ENST00000524226 HSFX1Q9UBD0 423 aa2.53□□□□□ -2
PCM1-222ENST00000524226 KLQ9UEF7 1012 aa2.53□□□□□ -2
PCM1-222ENST00000524226 WASF3Q9UPY6 502 aa2.53□□□□□ -2
PCM1-222ENST00000524226 TMEM5Q9Y2B1 443 aa2.53□□□□□ -2
PCM1-222ENST00000524226 TCAF1Q9Y4C2 921 aa2.53□□□□□ -2
PCM1-222ENST00000524226 AP4B1Q9Y6B7 739 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MRPL42Q9Y6G3 142 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 WASH4PA8MWX3 477 aa2.53□□□□□ -2
PCM1-222ENST00000524226 FOXO6A8MYZ6 492 aa2.53□□□□□ -2
PCM1-222ENST00000524226 B8ZZF3 427 aa2.53□□□□□ -2
PCM1-222ENST00000524226 L7N2F9 121 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RFXANKO14593 260 aa2.53□□□□□ -2
PCM1-222ENST00000524226 AZIN1O14977 448 aa2.53□□□□□ -2
PCM1-222ENST00000524226 TRIM3O75382 744 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 GABBR2O75899 941 aa2.53□□□□□ -2
PCM1-222ENST00000524226 VAPBO95292 243 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PAPSS2O95340 614 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 TOP3BO95985 862 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 IGHEP01854 428 aa2.53□□□□□ -2
PCM1-222ENST00000524226 FESP07332 822 aa2.53□□□□□ -2
PCM1-222ENST00000524226 VARSP26640 1264 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 PBX3P40426 434 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ID4P47928 161 aa2.53□□□□□ -2
PCM1-222ENST00000524226 INHBCP55103 352 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RAB10P61026 200 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SSTP61278 116 aa2.53□□□□□ -2
PCM1-222ENST00000524226 VAMP2P63027 116 aa2.53□□□□□ -2
PCM1-222ENST00000524226 CBX3Q13185 183 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RFTN1Q14699 578 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 MBTPS1Q14703 1052 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MED22Q15528 200 aa2.53□□□□□ -2
PCM1-222ENST00000524226 DPY19L1Q2PZI1 675 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PLEKHN1Q494U1 663 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 SLC9B1Q4ZJI4 515 aa2.53□□□□□ -2
PCM1-222ENST00000524226 FIP1L1Q6UN15 594 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 ANKRD33Q7Z3H0 272 aa2.53□□□□□ -2
PCM1-222ENST00000524226 SCD5Q86SK9 330 aa2.53□□□□□ -2
PCM1-222ENST00000524226 LAPTM4BQ86VI4 370 aa2.53□□□□□ -2
PCM1-222ENST00000524226 RANBP3LQ86VV4 465 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 CNTD1Q8N815 330 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ANKFN1Q8N957 763 aa2.53□□□□□ -2
PCM1-222ENST00000524226 OR8H1Q8NGG4 311 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MAPK15Q8TD08 544 aa2.53□□□□□ -2
PCM1-222ENST00000524226 HDAC2Q92769 488 aaKnown RBP2.53□□□□□ -2
PCM1-222ENST00000524226 TCEAL3Q969E4 200 aa2.53□□□□□ -2
PCM1-222ENST00000524226 AP2M1Q96CW1 435 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PANX1Q96RD7 426 aa2.53□□□□□ -2
PCM1-222ENST00000524226 ZNF347Q96SE7 839 aa2.53□□□□□ -2
PCM1-222ENST00000524226 MND1Q9BWT6 205 aa2.53□□□□□ -2
PCM1-222ENST00000524226 PHF7Q9BWX1 381 aaPredicted RBP2.53□□□□□ -2
PCM1-222ENST00000524226 TAPBPLQ9BX59 468 aa2.53□□□□□ -2
PCM1-222ENST00000524226 UNKQ9C0B0 810 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms