RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-222	ENST00000523953	AMBRA1	Q9C0C7	1298 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	ING2	Q9H160	280 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	TRIT1	Q9H3H1	467 aa	Known RBP	6.68	□□□□□ -1.34
CA1-222	ENST00000523953	TM9SF3	Q9HD45	589 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	GPRC5B	Q9NZH0	403 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	MARK1	Q9P0L2	795 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	TMEFF2	Q9UIK5	374 aa	Predicted RBP	6.68	□□□□□ -1.34
CA1-222	ENST00000523953	RPS6KA6	Q9UK32	745 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953	CDC14A	Q9UNH5	594 aa		6.68	□□□□□ -1.34
CA1-222	ENST00000523953		A0A0J9YVX5	310 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SCN2B	O60939	215 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SEC24D	O94855	1032 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ATE1	O95260	518 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SERPINA1	P01009	418 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	LRG1	P02750	347 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	MT-ND1	P03886	318 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	JUND	P17535	347 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	HNF4A	P41235	474 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	KIR3DL1	P43629	444 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PFN3	P60673	137 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	DEFB115	Q30KQ5	88 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PTCHD3	Q3KNS1	767 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SPOUT1	Q5T280	376 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	OTUD3	Q5T2D3	398 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	GRHL2	Q6ISB3	625 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	MBOAT1	Q6ZNC8	495 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	DCP2	Q8IU60	420 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SPART	Q8N0X7	666 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SETD9	Q8NE22	299 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	FNDC8	Q8TC99	324 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	LRIG1	Q96JA1	1093 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ZSCAN5A	Q9BUG6	496 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PIF1	Q9H611	641 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	IL1RAP	Q9NPH3	570 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SLC6A13	Q9NSD5	602 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	THG1L	Q9NWX6	298 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	DKK3	Q9UBP4	350 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	B4GALT6	Q9UBX8	382 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	BTNL2	Q9UIR0	455 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	CORO2B	Q9UQ03	480 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	RUVBL1	Q9Y265	456 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PCDHGA8	Q9Y5G5	932 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	LOC100130705	A0A1B0GUX0	176 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	EVPLL	A8MZ36	301 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	TGM5	O43548	720 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	UGT2B11	O75310	529 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	POLR2I	P36954	125 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	CTSO	P43234	321 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ASMT	P46597	345 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	RXRG	P48443	463 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	STK19	P49842	368 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	WNT3	P56703	355 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	KCNAB2	Q13303	367 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ELOA	Q14241	798 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ACOX1	Q15067	660 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	MOG	Q16653	247 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	VMAC	Q2NL98	169 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ZNF829	Q3KNS6	432 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	GTDC1	Q4AE62	458 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	HENMT1	Q5T8I9	393 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	LAIR2	Q6ISS4	152 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	CAPN13	Q6MZZ7	669 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	GCNT7	Q6ZNI0	430 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	DPY19L3	Q6ZPD9	716 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	R3HCC1L	Q7Z5L2	792 aa	Known RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	DEFB128	Q7Z7B8	93 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ZZZ3	Q8IYH5	903 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	NRSN1	Q8IZ57	195 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ARL10	Q8N8L6	244 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	TBC1D15	Q8TC07	691 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	NETO1	Q8TDF5	533 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	NUDT8	Q8WV74	236 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ASZ1	Q8WWH4	475 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	BORCS5	Q969J3	196 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	WDR34	Q96EX3	536 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	CCDC138	Q96M89	665 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	P2RY13	Q9BPV8	354 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	EPHX3	Q9H6B9	360 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SOX17	Q9H6I2	414 aa	Predicted RBP	6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PLSCR2	Q9NRY7	297 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	SAGE1	Q9NXZ1	904 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	ORC6	Q9Y5N6	252 aa		6.67	□□□□□ -1.34
CA1-222	ENST00000523953	PSMD11	O00231	422 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	RFXANK	O14593	260 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	PRAMEF4	O60810	478 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	PABPC1	P11940	636 aa	Known RBP	6.66	□□□□□ -1.34
CA1-222	ENST00000523953	BMP1	P13497	986 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	CCNA2	P20248	432 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	ELK4	P28324	431 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	NFATC3	Q12968	1075 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	PLCL1	Q15111	1095 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	SGO1	Q5FBB7	561 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	LDLRAP1	Q5SW96	308 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	GPR107	Q5VW38	600 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	PRAMEF9	Q5VWM5	478 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	KDM4D	Q6B0I6	523 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	ELMSAN1	Q6PJG2	1045 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	TMEM26	Q6ZUK4	368 aa		6.66	□□□□□ -1.34
CA1-222	ENST00000523953	CBLL1	Q75N03	491 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms