RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 CHKAP35790 457 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 TCF7P36402 384 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 PMP22Q01453 160 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 TWISTNBQ3B726 338 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 PDLIM3Q53GG5 364 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 STXBP5Q5T5C0 1151 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 IL27RAQ6UWB1 636 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 METTL7BQ6UX53 244 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 HAUS6Q7Z4H7 955 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 MAPK1IP1LQ8NDC0 245 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 C9orf43Q8TAL5 461 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM76AQ8TAV0 307 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 RFFLQ8WZ73 363 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 ZC3HAV1LQ96H79 300 aaKnown RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 TWNKQ96RR1 684 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 LITAFQ99732 161 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 P2RY13Q9BPV8 354 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 LZTS2Q9BRK4 669 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 C17orf75Q9HAS0 396 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 NOD2Q9HC29 1040 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 ZDHHC4Q9NPG8 344 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 HPS4Q9NQG7 708 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 SMYD2Q9NRG4 433 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 CISD1Q9NZ45 108 aaKnown RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 TAGLN3Q9UI15 199 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 MMP17Q9ULZ9 603 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 PSAT1Q9Y617 370 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 SMAD5-AS1Q9Y6J3 95 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 SLCO1B1Q9Y6L6 691 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 POLEQ07864 2286 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 TCRBV21S2A2A0A5A6 115 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 HEATR9A2RTY3 570 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 VWA3AA6NCI4 1184 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 LILRA5A6NI73 299 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 MEI4A8MW99 385 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 PEX12O00623 359 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 SPRY1O43609 319 aaPredicted RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 CSO75390 466 aaKnown RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 VTNP04004 478 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 HLA-DOBP13765 273 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC2A4P14672 509 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 CD58P19256 250 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 RBMS1P29558 406 aaKnown RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 OR1G1P47890 313 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 DUSP3P51452 185 aaPredicted RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 CLDN2P57739 230 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC20A2Q08357 652 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 KLRB1Q12918 225 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 NEDD9Q14511 834 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 KRT72Q14CN4 511 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 CCDC96Q2M329 555 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 USP41Q3LFD5 358 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ADCK5Q3MIX3 580 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ANKRD45Q5TZF3 282 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ARHGAP17Q68EM7 881 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 FUT10Q6P4F1 479 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 WDR73Q6P4I2 378 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC36A4Q6YBV0 504 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 B3GNT6Q6ZMB0 384 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC9B2Q86UD5 537 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 NFE4Q86UQ8 179 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 NME8Q8N427 588 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 MYCT1Q8N699 235 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ANKRD9Q96BM1 317 aaPredicted RBP3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 HVCN1Q96D96 273 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ERLEC1Q96DZ1 483 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 TMEM175Q9BSA9 504 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM167BQ9BTA0 163 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 BARHL1Q9BZE3 327 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 PCDH9Q9HC56 1237 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 ERAP1Q9NZ08 941 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 CNTRLQ7Z7A1 2325 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 VWFP04275 2813 aa3.6□□□□□ -1.83
NSMCE2-211ENST00000523549 HIVEP2P31629 2446 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 ASPDHA6ND91 283 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 RRN3P2A6NIE6 340 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 TCP11X1B4DZS4 312 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 SGK1O00141 431 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 ZNF197O14709 1029 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 BCAT2O15382 392 aaPredicted RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 CDH1P12830 882 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 PTGER4P35408 488 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 CSNK1EP49674 416 aaKnown RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 TBL3Q12788 808 aaKnown RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 RUNX3Q13761 415 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 PSMD5Q16401 504 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 C14orf28Q4W4Y0 310 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 LACTB2Q53H82 288 aaPredicted RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 C10orf62Q5T681 223 aaPredicted RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 CHERPQ8IWX8 916 aaKnown RBP3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 EID2Q8N6I1 236 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 ALLCQ8N6M5 410 aa3.59□□□□□ -1.83
NSMCE2-211ENST00000523549 SCCPDHQ8NBX0 429 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms