RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CDC16Q13042 620 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 RIN1Q13671 783 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 TUBB2AQ13885 445 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF789Q5FWF6 425 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 MBNL2Q5VZF2 373 aaKnown RBP6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ATL3Q6DD88 541 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ISM2Q6H9L7 571 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 CYB5D1Q6P9G0 228 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 USP45Q70EL2 814 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 STRADAQ7RTN6 431 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SLFN11Q7Z7L1 901 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 RAB43Q86YS6 212 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SYTL1Q8IYJ3 562 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 FAM71AQ8IYT1 594 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 CMTM4Q8IZR5 234 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 DSELQ8IZU8 1212 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF808Q8N4W9 903 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-211ENST00000522802 AVL9Q8NBF6 648 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 CLEC1AQ8NC01 280 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 EXD1Q8NHP7 514 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 PPP4R1Q8TF05 950 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 TM9SF4Q92544 642 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 JADE3Q92613 823 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 CENPIQ92674 756 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ZDHHC12Q96GR4 267 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 CNDP1Q96KN2 507 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 PPM1MQ96MI6 270 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 LRFN5Q96NI6 719 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 FCRL4Q96PJ5 515 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 PSKH2Q96QS6 385 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 WDR24Q96S15 920 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 MAP3K3Q99759 626 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 TUBB2BQ9BVA1 445 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 ENKD1Q9H0I2 346 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 NOD2Q9HC29 1040 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SLC40A1Q9NP59 571 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 KLC4Q9NSK0 619 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 GPATCH2LQ9NWQ4 482 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 KCTD5Q9NXV2 234 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SEMA5BQ9P283 1151 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SLC23A2Q9UGH3 650 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 SH3BGRL2Q9UJC5 107 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 DNAJC16Q9Y2G8 782 aa6.13□□□□□ -1.43
VPS13B-211ENST00000522802 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
VPS13B-211ENST00000522802 FN1P02751 2386 aaKnown RBP6.13□□□□□ -1.43
VPS13B-211ENST00000522802 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CCDC78A2IDD5 438 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TMEM200CA6NKL6 621 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 OR5K4A6NMS3 321 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 DFFAO00273 331 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PCDH17O14917 1159 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CCP110O43303 1012 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 GRID2O43424 1007 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 JRKO75564 520 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 KLF7O75840 302 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 LSM8O95777 96 aaKnown RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PEX11BO96011 259 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 JCHAINP01591 159 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PDHA1P08559 390 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF8P17098 575 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PON1P27169 355 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 RFC1P35251 1148 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 STC1P52823 247 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 DRG2P55039 364 aaKnown RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 WNT3AP56704 352 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 GSDMDP57764 484 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TPI1P60174 286 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 MAXP61244 160 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 ADORA2A-AS1P86434 159 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 OTUD4Q01804 1114 aaKnown RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 ACY1Q03154 408 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TLE4Q04727 773 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 NSUN2Q08J23 767 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 Q0VFX4 171 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 MALLQ13021 153 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 ZNF169Q14929 603 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 DNTTIP2Q5QJE6 756 aaKnown RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PLEKHA7Q6IQ23 1121 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 FBXO38Q6PIJ6 1188 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 D2HGDHQ8N465 521 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 SLC20A1Q8WUM9 679 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 NELFBQ8WX92 580 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CPT1BQ92523 772 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CLIP3Q96DZ5 547 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 C14orf79Q96F83 325 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 SCRN2Q96FV2 425 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 GSDMAQ96QA5 445 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 C11orf70Q9BRQ4 267 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 TLR10Q9BXR5 811 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 RAB33BQ9H082 229 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 PDCL3Q9H2J4 239 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 CATSPERBQ9H7T0 1116 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 FAM207AQ9NSI2 230 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-211ENST00000522802 POT1Q9NUX5 634 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 OLAHQ9NV23 265 aa6.12□□□□□ -1.43
VPS13B-211ENST00000522802 P4HTMQ9NXG6 502 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms