RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FITM2Q8N6M3 262 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 C1orf52Q8N6N3 182 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 OR9A1PQ8NGU1 263 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC5A11Q8WWX8 675 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PSKH2Q96QS6 385 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 KLRF1Q9NZS2 232 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 H3BNX3 289 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 NPC1O15118 1278 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 TRIM3O75382 744 aaPredicted RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ZBTB11O95625 1053 aaPredicted RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 BDKRB1P46663 353 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 IDH3AP50213 366 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ELAVL3Q14576 367 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 MAPK14Q16539 360 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 C12orf76Q8N812 135 aaPredicted RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PJA1Q8NG27 643 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PPM1HQ9ULR3 514 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 AHCYL1O43865 530 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 KAT7O95251 611 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 YAP1P46937 504 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 C17orf99Q6UX52 265 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 Q6ZVL8 140 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 SLCO2A1Q92959 643 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF304Q9HCX3 659 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PHF24Q9UPV7 400 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 A0A1W2PQ72 361 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 HCRTO43612 131 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF865P0CJ78 1059 aaPredicted RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 OXTRP30559 389 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 SEPHS1P49903 392 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 CLCN4P51793 760 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 DEFB119Q8N690 84 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 FATE1Q969F0 183 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 CHID1Q9BWS9 393 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 AJAP1Q9UKB5 411 aaPredicted RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 ANKRD26Q9UPS8 1709 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 CLEC3AO75596 197 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 NELFEP18615 380 aaKnown RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 DNAJB1P25685 340 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 PREPP48147 710 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 STC1P52823 247 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 DSTNP60981 165 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 SLCO6A1Q86UG4 719 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 NXPE1Q8N323 547 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 CLDN19Q8N6F1 224 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 TRPV1Q8NER1 839 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 FLRT1Q9NZU1 646 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 LOC110117498-PIK3R3F6TDL0 507 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 LATS1O95835 1130 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 DHFRP00374 187 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 GSRP00390 522 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 KLK1P06870 262 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 KCNJ5P48544 419 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM115Q12893 351 aaPredicted RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 SCARB2Q14108 478 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 DNM1P34Q6PK57 102 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 COL21A1Q96P44 957 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 OXSMQ9NWU1 459 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF222Q9UK12 451 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 UTS2RQ9UKP6 389 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 TELO2Q9Y4R8 837 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 LEFTY1O75610 366 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 PAK4O96013 591 aaPredicted RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 TYRP1P17643 537 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 HMGCS1Q01581 520 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC25A11Q02978 314 aaKnown RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 KCNC3Q14003 757 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 SMARCD3Q6STE5 483 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 FAM131AQ6UXB0 335 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 RASSF6Q6ZTQ3 369 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 ZSCAN1Q8NBB4 408 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 PIGKQ92643 395 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 BORCS5Q969J3 196 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 GTPBP3Q969Y2 492 aaKnown RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 RNF121Q9H920 327 aa15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 FARSBQ9NSD9 589 aaKnown RBP15.84■□□□□ 0.13
PCDHA3-201ENST00000522353 A8MUI8 341 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 hCG_2039718K7EN88 272 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 TP73O15350 636 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 SDC2P34741 201 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 RPS6KA3P51812 740 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 KLHL26Q53HC5 615 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 COLEC12Q5KU26 742 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC51AQ86UW1 340 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC25A36Q96CQ1 311 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF570Q96NI8 536 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 OR51V1Q9H2C8 321 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 B3GAT2Q9NPZ5 323 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 ITGB1BP2Q9UKP3 347 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 NOX1Q9Y5S8 564 aa15.83■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF487B1APH4 448 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 B4GALT2O60909 372 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 TCEA3O75764 348 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 HMGN1P05114 100 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 TLR1Q15399 786 aa15.83■□□□□ 0.12
PCDHA3-201ENST00000522353 GPR68Q15743 365 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms