RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 C5orf30Q96GV9 206 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 C16orf45Q96MC5 204 aaPredicted RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 PRAM1Q96QH2 718 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 RUFY1Q96T51 708 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CSF3RQ99062 836 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 MYCBPQ99417 103 aaPredicted RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 PCYT2Q99447 389 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 HSD3B7Q9H2F3 369 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 TSPY26PQ9H489 355 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 MINDY3Q9H8M7 445 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CDH20Q9HBT6 801 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 MYNNQ9NPC7 610 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 MIOSQ9NXC5 875 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 SLCO1C1Q9NYB5 712 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 TAS2R3Q9NYW6 316 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 SPG21Q9NZD8 308 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 ACTR3BQ9P1U1 418 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 FBXW2Q9UKT8 454 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 DLGAP4Q9Y2H0 992 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 A0A0G2JNG1 304 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 C13orf42A0A1B0GVH6 325 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 FAM172BPA6NC97 362 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 ST8SIA3O43173 380 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 WDR1O75083 606 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 LETM1O95202 739 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 GUCA1CO95843 209 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 WDPCPO95876 746 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 C9P02748 559 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 ATP1A1P05023 1023 aaKnown RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 ALPPP05187 535 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 ALPPL2P10696 532 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 CETPP11597 493 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 MYL6BP14649 208 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 MYOD1P15172 320 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TCF4P15884 667 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 CD22P20273 847 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 CBLP22681 906 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 KCNJ1P48048 391 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 GMPSP49915 693 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 CASP9P55211 416 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TPD52P55327 224 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 NME5P56597 212 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 HSD17B7P56937 341 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 BRWD1-AS2P59051 145 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 MAT1AQ00266 395 aaKnown RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 GAGE5Q13069 117 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 GAGE6Q13070 117 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TNK1Q13470 666 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 KIR2DS5Q14953 304 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SYT14P1Q58G82 188 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.8□□□□□ -1.8
SQLE-204ENST00000520493 PACS1Q6VY07 963 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TRMT1LQ7Z2T5 733 aaKnown RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 COMMD2Q86X83 199 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TMEM219Q86XT9 240 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 PTOV1Q86YD1 416 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 FAM219AQ8IW50 185 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 RYBPQ8N488 228 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 NCOA7Q8NI08 942 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SLC20A1Q8WUM9 679 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SSMEM1Q8WWF3 244 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SLC13A3Q8WWT9 602 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 FIG4Q92562 907 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SEMA4DQ92854 862 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 DAZLQ92904 295 aaKnown RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 OTUB1Q96FW1 271 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 TMEM19Q96HH6 336 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 AKIRIN1Q9H9L7 192 aaPredicted RBP3.8□□□□□ -1.8
SQLE-204ENST00000520493 TBC1D17Q9HA65 648 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 ACKR4Q9NPB9 350 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SERINC1Q9NRX5 453 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 PNPLA3Q9NST1 481 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TMEM161AQ9NX61 479 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 NINJ2Q9NZG7 142 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 FETUBQ9UGM5 382 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 TRIM17Q9Y577 477 aa3.8□□□□□ -1.8
SQLE-204ENST00000520493 CGNL1Q0VF96 1302 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 A0A0G2JPF8 293 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SYCE3A1L190 88 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 CTAGE9A4FU28 777 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 PRR23AA6NEV1 266 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 HNRNPCL3B7ZW38 293 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 AP5Z1O43299 807 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 XPNPEP2O43895 674 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 CRYAAP02489 173 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 TFAP2AP05549 437 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 CTAGE8P0CG41 777 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 C8orf89P0DMQ9 161 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 HNRNPCL4P0DMR1 293 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SPP1P10451 314 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 CCNA2P20248 432 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 RPL21P46778 160 aaKnown RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 RGS7P49802 495 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 MMP15P51511 669 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms