RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PFKFB1P16118 471 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 GNAZP19086 355 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 OAS2P29728 719 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 GABRA5P31644 462 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TIMP3P35625 211 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 MAP2K2P36507 400 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 CDKN1AP38936 164 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TNNT3P45378 269 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TDO2P48775 406 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 THOP1P52888 689 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PNRC1Q12796 327 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PRKAA1Q13131 559 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PRPF4BQ13523 1007 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 SNTB1Q13884 538 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 C9orf152Q5JTZ5 239 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC158Q5M9N0 1113 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 BEND6Q5SZJ8 279 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TEX35Q5T0J7 233 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 SFMBT2Q5VUG0 894 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMEM211Q6ICI0 200 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 MEX3BQ6ZN04 569 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 MARK2Q7KZI7 788 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PPP1R42Q7Z4L9 355 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 NBPF5PQ86XG9 351 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ERC1Q8IUD2 1116 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 LSMEM1Q8N8F7 131 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 CNBD1Q8NA66 436 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKRD20A12PQ8NF67 263 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR2T12Q8NG77 320 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR2AJ1Q8NGZ0 328 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 RNF128Q8TEB7 428 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZNF354BQ96LW1 612 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 FNDC11Q9BVV2 318 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 LSG1Q9H089 658 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 DPAGT1Q9H3H5 408 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 SDF2L1Q9HCN8 221 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PIH1D3Q9NQM4 214 aaKnown RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ECHDC1Q9NTX5 307 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 DPP3Q9NY33 737 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 TAB2Q9NYJ8 693 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 DBF4Q9UBU7 674 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC7A7Q9UM01 511 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ATP6V1DQ9Y5K8 247 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PEAK1Q9H792 1746 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A1W2PRB8 838 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 HIP1O00291 1037 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CTAGE5O15320 804 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 P4HA2O15460 535 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SYNCRIPO60506 623 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 PLOD3O60568 738 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 RNASEH1O60930 286 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SURF6O75683 361 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SP1P08047 785 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 DANCRP0C864 163 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC192P0DO97 292 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SKILP12757 684 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 LIFP15018 202 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CASTP20810 708 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SYT1P21579 422 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CAPZA2P47755 286 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCR3P51677 355 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CDH13P55290 713 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 IRX1P78414 480 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 AIMP1Q12904 312 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 HSPB3Q12988 150 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ALCAMQ13740 583 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 KCTD2Q14681 263 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 NECTIN1Q15223 517 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 PTPN14Q15678 1187 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TPD52L1Q16890 204 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMEM266Q2M3C6 531 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 WDR38Q5JTN6 314 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 C1QTNF12Q5T7M4 302 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 RNASEH2BQ5TBB1 312 aaKnown RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 PLA2G4FQ68DD2 849 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ARMCX5Q6P1M9 558 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM198BQ6UWH4 519 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CEACAM20Q6UY09 585 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 Q6ZTC4 211 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANO5Q75V66 913 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZNF554Q86TJ5 538 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 LUZP1Q86V48 1076 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 COMMD2Q86X83 199 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMEM139Q8IV31 216 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 UNC5CLQ8IV45 518 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CRYBG2Q8N1P7 616 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 FBXL16Q8N461 479 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 TTC30BQ8N4P2 665 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 STPG4Q8N801 248 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SPC24Q8NBT2 197 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 MSANTD4Q8NCY6 345 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CFAP61Q8NHU2 1237 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC26Q8TAB7 109 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 GRAPLQ8TC17 118 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLAMF9Q96A28 289 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 PGLYRP2Q96PD5 576 aa3.04□□□□□ -1.92
HMGB1P41-201ENST00000520234 MYADMQ96S97 322 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms