RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 EXT2Q93063 718 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ESAMQ96AP7 390 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 LINGO1Q96FE5 620 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ZNF512Q96ME7 567 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 FAM193BQ96PV7 902 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 MCCC1Q96RQ3 725 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 LYSMD1Q96S90 227 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ZNF382Q96SR6 550 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 CDK5RAP1Q96SZ6 601 aaKnown RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ACOX2Q99424 681 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 CINPQ9BW66 212 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 NUSAP1Q9BXS6 441 aaKnown RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 SEZ6LQ9BYH1 1024 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ZBP1Q9H171 429 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 COPS7BQ9H9Q2 264 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 MID1IP1Q9NPA3 183 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 IL26Q9NPH9 171 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 DLL4Q9NR61 685 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ARMC1Q9NVT9 282 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 UCKL1Q9NWZ5 548 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 SMPD4Q9NXE4 827 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 CCDC167Q9P0B6 97 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 HECAQ9UBI9 543 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 ZNF639Q9UID6 485 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 PTBP2Q9UKA9 531 aaKnown RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 CNOT11Q9UKZ1 510 aaKnown RBP4.42□□□□□ -1.7
PABPC1-212ENST00000519622 FAM50BQ9Y247 325 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 DHRS7Q9Y394 339 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 PPIL1Q9Y3C6 166 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 FIS1Q9Y3D6 152 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 PRKAB1Q9Y478 270 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 TIMM22Q9Y584 194 aa4.42□□□□□ -1.7
PABPC1-212ENST00000519622 PIKFYVEQ9Y2I7 2098 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 A0A0J9YYE9 177 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TRIM43BA6NCK2 446 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 NPIPB15A6NHN6 443 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 BBIP1A8MTZ0 92 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SUPT3HB4E1H0 165 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 H0YJX3 145 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 BTN3A1O00481 513 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 NR5A2O00482 541 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SOCS2O14508 198 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 LSM1O15116 133 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ARPC2O15144 300 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 VILLO15195 856 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TEX28O15482 410 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PQBP1O60828 265 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TBL1XO60907 577 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SMIM24O75264 130 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SUPT3HO75486 399 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SRP72O76094 671 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 RHOBTB1O94844 696 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 OR6B1O95007 311 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 OR4F21O95013 312 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PRSS23O95084 383 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ESRRBO95718 433 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 BAG2O95816 211 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 MPIG6BO95866 241 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 IL18BPO95998 194 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TRBC1P01850 177 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 C1QCP02747 245 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 FESP07332 822 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 C1SP09871 688 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 LINC00032P0C843 101 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PABPC4LP0CB38 370 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ZCCHC18P0CG32 403 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SRCP12931 536 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 CTPS1P17812 591 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 LBPP18428 481 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PTX3P26022 381 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PTPN6P29350 595 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SLC7A1P30825 629 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PTGER3P43115 390 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ID4P47928 161 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ALDH3B2P48448 385 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SLC11A2P49281 568 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TUFMP49411 452 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 GSK3BP49841 420 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 STK19P49842 368 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 GZMMP51124 257 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 CLCN2P51788 898 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ATXN3P54252 364 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SLC12A2P55011 1212 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 IL2P60568 153 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 UFM1P61960 85 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 WDR5P61964 334 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 AP1S1P61966 158 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PHC1P78364 1004 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 SMAD3P84022 425 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 FOLH1Q04609 750 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TLE2Q04725 743 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 LAMB3Q13751 1172 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 CAPRIN1Q14444 709 aaKnown RBP4.41□□□□□ -1.7
PABPC1-212ENST00000519622 PDK3Q15120 406 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 TGFBIQ15582 683 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 ATP6AP1Q15904 470 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 LRRC36Q1X8D7 754 aa4.41□□□□□ -1.7
PABPC1-212ENST00000519622 DEFB115Q30KQ5 88 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms