RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF700Q9H0M5 742 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 TSPY26PQ9H489 355 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 STMN3Q9NZ72 180 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ZC3H7BQ9UGR2 993 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 SLC39A10Q9ULF5 831 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 PRSS21Q9Y6M0 314 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.67
TRAPPC9-203ENST00000517667 FBN3Q75N90 2809 aa10.9□□□□□ -0.67
TRAPPC9-203ENST00000517667 LOC102723996A0A087X1L8 192 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 SYCE3A1L190 88 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 FAM221AA4D161 298 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 FOXO6A8MYZ6 492 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 TTI1O43156 1089 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 CTSVO60911 334 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 ZNF189O75820 626 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 ABOP16442 354 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 COMTP21964 271 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 UBASH3AP57075 661 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 ALDH6A1Q02252 535 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 SRSF11Q05519 484 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 ASTE1Q2TB18 679 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 FRMPD2BQ6IN97 320 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 TTC23LQ6PF05 361 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 NAPRTQ6XQN6 538 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 BBS12Q6ZW61 710 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 RNF44Q7L0R7 432 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 LAPTM4BQ86VI4 370 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 CDKL3Q8IVW4 592 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 KATNAL2Q8IYT4 538 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 RCOR2Q8IZ40 523 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 DTWD1Q8N5C7 304 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 C2orf73Q8N5S3 287 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 LMNTD1Q8N9Z9 388 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 STYXQ8WUJ0 223 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 CABS1Q96KC9 395 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 TTC1Q99614 292 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 TGIF2Q9GZN2 237 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 MKKSQ9NPJ1 570 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 TRPC4Q9UBN4 977 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 HYOU1Q9Y4L1 999 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 MRFAP1Q9Y605 127 aa10.89□□□□□ -0.67
TRAPPC9-203ENST00000517667 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 E9PLN8 166 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 PHF2O75151 1096 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 FAM155BO75949 473 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 MED26O95402 600 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 EIF2S1P05198 315 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 CELA2AP08217 269 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 ANXA5P08758 320 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 CD99P14209 185 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 MSNP26038 577 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 CSE1LP55060 971 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 HSPA14Q0VDF9 509 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 GRB7Q14451 532 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 PCOLCEQ15113 449 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 TCEAL1Q15170 157 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 CCDC181Q5TID7 509 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 TMEM205Q6UW68 189 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 TMEM178AQ8NBL3 297 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 FAM98AQ8NCA5 519 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 RAD51AP1Q96B01 352 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 ZNF354BQ96LW1 612 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 C10orf90Q96M02 699 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 SPATA13Q96N96 652 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 IL17FQ96PD4 163 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 ZFYVE21Q9BQ24 234 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 YIPF2Q9BWQ6 316 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 IMPACTQ9P2X3 320 aa10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 ZNF469Q96JG9 3925 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-203ENST00000517667 LOC105369274A0A096LPK9 316 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 LOC102723532A0A0G2JNH3 316 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 ASPDHA6ND91 283 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 PRRG2O14669 202 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 VPS26AO75436 327 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 TSPAN12O95859 305 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 APOA4P06727 396 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 CYC1P08574 325 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 CD46P15529 392 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 CTNNA2P26232 953 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 SLC26A3P40879 764 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 SPARCL1Q14515 664 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 IQCB1Q15051 598 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 OR4N4Q8N0Y3 316 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 GHDCQ8N2G8 530 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 CHDHQ8NE62 594 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 OR2L3Q8NG85 312 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 CFAP61Q8NHU2 1237 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 HMGCLL1Q8TB92 370 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 AGAP11Q8TF27 550 aa10.87□□□□□ -0.67
TRAPPC9-203ENST00000517667 METTL21AQ8WXB1 218 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms