RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 LILRA5A6NI73 299 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MPHOSPH10O00566 681 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KCNJ13O60928 360 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PRDM1O75626 825 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 AKR7A3O95154 331 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CELA2AP08217 269 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SKILP12757 684 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 GM2AP17900 193 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 DGKAP23743 735 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ARRB2P32121 409 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CHRNA3P32297 505 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MMP13P45452 471 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RPL21P46778 160 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HNRNPFP52597 415 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PDX1P52945 283 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SLC26A5P58743 744 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RELQ04864 619 aaPredicted RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 DPTQ07507 201 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 IL10RBQ08334 325 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MYBPHQ13203 477 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 GAMTQ14353 236 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ACKR1Q16570 336 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RBBP7Q16576 425 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CALCRLQ16602 461 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TDRD12Q587J7 1177 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 EFHC1Q5JVL4 640 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ZNF770Q6IQ21 691 aaPredicted RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NEK5Q6P3R8 708 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RHBDF2Q6PJF5 856 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 LINGO4Q6UY18 593 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RBM43Q6ZSC3 357 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PLEKHM3Q6ZWE6 761 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SATL1Q86VE3 508 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 LCA5Q86VQ0 697 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM219Q86XT9 240 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM126BQ8IUX1 230 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ADHFE1Q8IWW8 467 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CDK20Q8IZL9 346 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 LGI2Q8N0V4 545 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PRR26Q8N8Z3 221 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 LMNTD1Q8N9Z9 388 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CCDC63Q8NA47 563 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SMYD1Q8NB12 490 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PPFIBP2Q8ND30 876 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM185AQ8NFB2 350 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CCDC110Q8TBZ0 833 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SAP25Q8TEE9 199 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ASB5Q8WWX0 329 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RFT1Q96AA3 541 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM186Q96B77 213 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KCNK16Q96T55 309 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TRMT61BQ9BVS5 477 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 C1QTNF7Q9BXJ2 289 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 IDI2Q9BXS1 227 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 DDX47Q9H0S4 455 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RWDD1Q9H446 243 aaPredicted RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PELI2Q9HAT8 420 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KCNMB3Q9NPA1 279 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 A4GALTQ9NPC4 353 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NGBQ9NPG2 151 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MRPL17Q9NRX2 175 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ZCCHC3Q9NUD5 404 aaKnown RBP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 OCIAD1Q9NX40 245 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SOHLH2Q9NX45 425 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ZNF224Q9NZL3 707 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PKD2L2Q9NZM6 624 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CCPG1Q9ULG6 757 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MYRFQ9Y2G1 1151 aa3.05□□□□□ -1.92
SCARNA15.2-201ENST00000516409 FAM205AQ6ZU69 1335 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 A0A0G2JNG1 304 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 A0A0G2JPF8 293 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 A0A1W2PRB8 838 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 FAM149AA5PLN7 773 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ARHGAP42A6NI28 874 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KPNA7A9QM74 516 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PRR32B1ATL7 298 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 C17orf105B2RV13 164 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HNRNPCL3B7ZW38 293 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM150CB9EJG8 249 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RASGRF2O14827 1237 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ARPC2O15144 300 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ACSL4O60488 711 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NUDT17P0C025 328 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HNRNPCL4P0DMR1 293 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PSG1P11464 419 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HLA-DOBP13765 273 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NCF1P14598 390 aaPredicted RBP3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CPA3P15088 417 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ARF4P18085 180 aaPredicted RBP3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ARCN1P48444 511 aaKnown RBP3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RPS18P62269 152 aaKnown RBP3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KCNJ10P78508 379 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MBTD1Q05BQ5 628 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SULT2A1Q06520 285 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SRSF4Q08170 494 aaKnown RBP3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 Q0VFX4 171 aa3.04□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PPP1R8Q12972 351 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms