RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 OR2T3Q8NH03 318 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 GRIN3AQ8TCU5 1115 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 AGAP4Q96P64 663 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 C1QTNF1Q9BXJ1 281 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PINK1Q9BXM7 581 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ARHGAP39Q9C0H5 1083 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 EVA1BQ9NVM1 165 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ACTR10Q9NZ32 417 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 UBP1Q9NZI7 540 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 A0A087WXM4 84 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 A0A0U1RQF3 1178 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CLDN4O14493 209 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 POP7O75817 140 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CABYRO75952 493 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TPH1P17752 444 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 DCKP27707 260 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CD79BP40259 229 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 EIF2S3P41091 472 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF157P51786 506 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TRAM2Q15035 370 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ARMCX4Q5H9R4 360 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KANK2Q63ZY3 851 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 DENND5AQ6IQ26 1287 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ANKS3Q6ZW76 656 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KCNMB4Q86W47 210 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 FBXO15Q8NCQ5 510 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SPATA22Q8NHS9 363 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 S100ZQ8WXG8 99 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TUBGCP3Q96CW5 907 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 MAGED4Q96JG8 741 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 VAT1Q99536 393 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SERPINI1Q99574 410 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TCF25Q9BQ70 676 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 NAA50Q9GZZ1 169 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 OPN3Q9H1Y3 402 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PIGUQ9H490 435 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 NANOGQ9H9S0 305 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 BFARQ9NZS9 450 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TRABD2BA6NFA1 517 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 GPR182O15218 404 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 MAFKO60675 156 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 B3GAT3O94766 335 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KCNK2O95069 426 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 GOT2P00505 430 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 JCHAINP01591 159 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IMPDH1P20839 514 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 S100PP25815 95 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 GABRB3P28472 473 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IDH3AP50213 366 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CCR9P51686 369 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 DEFA6Q01524 100 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KCNC3Q14003 757 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PPP2R5DQ14738 602 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF169Q14929 603 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 NR6A1Q15406 480 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 RALGPS1Q5JS13 557 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 HECTD3Q5T447 861 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 AFMIDQ63HM1 303 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 RAB12Q6IQ22 244 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 LRFN4Q6PJG9 635 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SCD5Q86SK9 330 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 POC5Q8NA72 575 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ABHD11Q8NFV4 315 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 OR4M2Q8NGB6 313 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IFI44Q8TCB0 444 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 METTL21AQ8WXB1 218 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 JADE3Q92613 823 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PDXPQ96GD0 296 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 BBS4Q96RK4 519 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IL22Q9GZX6 179 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ILKAPQ9H0C8 392 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 MMP27Q9H306 513 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PRMT8Q9NR22 394 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IMPAD1Q9NX62 359 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CNOT6Q9ULM6 557 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC22A14Q9Y267 594 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 ANKRD36A6QL64 1941 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 SAGE2PA6NJ88 616 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 EFCAB7A8K855 629 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 LOC110117498-PIK3R3F6TDL0 507 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 H3BNH8 94 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC22A2O15244 555 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 PLOD3O60568 738 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 MT-CYBP00156 380 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 PLGP00747 810 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 RALBP11234 206 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 SPRP35270 261 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 GSK3AP49840 483 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 MLLT10P55197 1068 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 PSPHP78330 225 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 CBX2Q14781 532 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 ACOX1Q15067 660 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 PON3Q15166 354 aa7.28□□□□□ -1.24
PDLIM5-219ENST00000514743 DHCR24Q15392 516 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms