RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SLC25A37Q9NYZ2 338 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 LSM2Q9Y333 95 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 V9GYH0 126 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TICRRQ7Z2Z1 1910 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CCDC160A6NGH7 325 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PRR33A8MZF0 331 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 H3BMM5 538 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RETP07949 1114 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 GDI1P31150 447 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 HOXA6P31267 233 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 HTR3AP46098 478 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PLK1P53350 603 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 EFEMP1Q12805 493 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CDK5R2Q13319 367 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RBM20Q5T481 1227 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SDHAF4Q5VUM1 108 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 BROXQ5VW32 411 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 STEAP3Q658P3 488 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 HEATR6Q6AI08 1181 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CILP2Q8IUL8 1156 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SLC41A1Q8IVJ1 513 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SLC44A2Q8IWA5 706 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SCUBE3Q8IX30 993 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TRIB3Q96RU7 358 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 EHD1Q9H4M9 534 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SOX17Q9H6I2 414 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ACSS2Q9NR19 701 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SPHK2Q9NRA0 654 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 LIMD1Q9UGP4 676 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 UTS2RQ9UKP6 389 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 F5H5T6 163 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 CLDN11O75508 207 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 APODP05090 189 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 ABCB1P08183 1280 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-205ENST00000514271 ADH5P11766 374 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 ENO3P13929 434 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-205ENST00000514271 NAGAP17050 411 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 TFF2Q03403 129 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 HKDC1Q2TB90 917 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 PCID2Q5JVF3 399 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 ANKRD34AQ69YU3 496 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 PARM1Q6UWI2 310 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 CES3Q6UWW8 571 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 GDPD3Q7L5L3 318 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 CHST15Q7LFX5 561 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-205ENST00000514271 BPHLQ86WA6 291 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-205ENST00000514271 DENND6AQ8IWF6 608 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 CARNMT1Q8N4J0 409 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 TRIML2Q8N7C3 387 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 DSN1Q9H410 356 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 CATSPERBQ9H7T0 1116 aa7.21□□□□□ -1.25
CLIP1-205ENST00000514271 A0A0J9YYE9 177 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 FAM172BPA6NC97 362 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 C2orf78A6NCI8 922 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 AGAP5A6NIR3 686 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 LRRC72A6NJI9 287 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 H0Y626 953 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 AP3B1O00203 1094 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 UBDO15205 165 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 DYRK3O43781 588 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM127O75204 238 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 PMPCBO75439 489 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF30P17039 623 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 AGXTP21549 392 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 CDH4P55283 916 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 OR4D2P58180 307 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ARPC4P59998 168 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 CYTH1Q15438 398 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 OR4D1Q15615 310 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 GRAMD4Q6IC98 578 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 TTC33Q6PID6 262 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 Q6ZSR9 355 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 KIAA0907Q7Z7F0 614 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 TAC4Q86UU9 113 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ESX1Q8N693 406 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 LINC00469Q8N7U9 141 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ING5Q8WYH8 240 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 CLDN23Q96B33 292 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 CCDC126Q96EE4 140 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 OR2A14Q96R47 310 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 APOL5Q9BWW9 433 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ASPSCR1Q9BZE9 553 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 TOR3AQ9H497 397 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 RAD21L1Q9H4I0 556 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ALG2Q9H553 416 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ACOT13Q9NPJ3 140 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 SLC2A6Q9UGQ3 507 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 FBXL21Q9UKT6 434 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 PNMA8BQ9ULN7 279 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 IGLV3-10A0A075B6K4 115 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 A0A1B0GVM2 712 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 DRGXA6NNA5 263 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 LDB2O43679 373 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ACADMP11310 421 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 ACPPP15309 386 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 TCEA1P23193 301 aaKnown RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 FASP25445 335 aa7.21□□□□□ -1.26
CLIP1-205ENST00000514271 CORO1AP31146 461 aaKnown RBP7.21□□□□□ -1.26
CLIP1-205ENST00000514271 LAPTM5Q13571 262 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms