RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TNFRSF10CO14798 259 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PI15O43692 258 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 IDSP22304 550 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 AKT2P31751 481 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 POLR2JP52435 117 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 YPEL5P62699 121 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PTGR1Q14914 329 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 UBXN2BQ14CS0 331 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 TLR1Q15399 786 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SNCBQ16143 134 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 UAP1L1Q3KQV9 507 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 USP39Q53GS9 565 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 ATG9BQ674R7 924 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 ABI3BPQ7Z7G0 1075 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 TMPRSS11BQ86T26 416 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 OR7G3Q8NG95 312 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 TSACCQ96A04 125 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 BIRC7Q96CA5 298 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SPDL1Q96EA4 605 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 EHD1Q9H4M9 534 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PRDM8Q9NQV8 689 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SPATA6Q9NWH7 488 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 NDE1Q9NXR1 346 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 PACSIN3Q9UKS6 424 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 MRPS17Q9Y2R5 130 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 NDUFAF1Q9Y375 327 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 KNL1Q8NG31 2342 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 A0A1W2PPV9 198 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 EML2O95834 649 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 C1GALT1C1LP0DN25 315 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 BCKDHAP12694 445 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 JAK1P23458 1154 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 CCND1P24385 295 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 ACTR3P61158 418 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 PSME3P61289 254 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 CTBSQ01459 385 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 CSTF3Q12996 717 aaKnown RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 COQ5Q5HYK3 327 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 LCTLQ6UWM7 567 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 BNC2Q6ZN30 1099 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 RIPOR1Q6ZS17 1223 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 Q6ZSR6 202 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 SLC5A11Q8WWX8 675 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 VPS33AQ96AX1 596 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 C11orf24Q96F05 449 aaPredicted RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 CMTM7Q96FZ5 175 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 APIPQ96GX9 242 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 CAMK1GQ96NX5 476 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 FERD3LQ96RJ6 166 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 ORAI3Q9BRQ5 295 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 GPR174Q9BXC1 333 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 SPNS1Q9H2V7 528 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 GEMIN8Q9NWZ8 242 aaKnown RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 SPATA7Q9P0W8 599 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 POMPQ9Y244 141 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 EIF3LQ9Y262 564 aaKnown RBP12.41□□□□□ -0.42
PVT1-203ENST00000513868 DLGAP4Q9Y2H0 992 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 PCDHGA11Q9Y5H2 935 aa12.41□□□□□ -0.42
PVT1-203ENST00000513868 ABCA7Q8IZY2 2146 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 GOLGA4Q13439 2230 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 PRAMEF33A0A0G2JMD5 474 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 OR52A4PA6NMU1 304 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 PRAMEF26H0Y7S4 382 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 FXYD1O00168 92 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 CFLARO15519 480 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 EEDO75530 441 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 ETHE1O95571 254 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 AMD1P17707 334 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 HTR1BP28222 390 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 CD6P30203 668 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 OXTRP30559 389 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 HSD17B2P37059 387 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 THOP1P52888 689 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 KCNK10P57789 538 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 RPE65Q16518 533 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 ALG11Q2TAA5 492 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 PAGE3Q5JUK9 113 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 PRAMEF14Q5SWL7 426 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 PRAMEF13Q5VWM6 474 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms