RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 APC2O95996 2303 aa6.88□□□□□ -1.31
PDLIM5-215ENST00000511586 IGF2RP11717 2491 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ACACAQ13085 2346 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 OR2A25A4D2G3 310 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 NPEPPSL1A6NEC2 478 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CDC7O00311 574 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 PHGDHO43175 533 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 RIPK2O43353 540 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CPNE3O75131 537 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 OR2B3O76000 313 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 GUCA1CO95843 209 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 NTRK1P04629 796 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 KLK3P07288 261 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ANXA5P08758 320 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ABHD2P08910 425 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 HBQ1P09105 142 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 HRH2P25021 359 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC26A3P40879 764 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 MSH2P43246 934 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 GABRA4P48169 554 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 SERPINB9P50453 376 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ATP6V0D1P61421 351 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CDKL1Q00532 357 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 NAE1Q13564 534 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CSHL1Q14406 222 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TSNQ15631 228 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 UBAP2Q5T6F2 1119 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 PRAMEF13Q5VWM6 474 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ICE2Q659A1 982 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 FCRL6Q6DN72 434 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CAPN13Q6MZZ7 669 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TLDC1Q6P9B6 456 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 C19orf48Q6RUI8 117 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 AGTRAPQ6RW13 159 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 SBSNQ6UWP8 590 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CCDC81Q6ZN84 652 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 MBOAT1Q6ZNC8 495 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 FRA10AC1Q70Z53 315 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TAOK1Q7L7X3 1001 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ADAMTSL2Q86TH1 951 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TBC1D1Q86TI0 1168 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 LRRC56Q8IYG6 542 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 SPATA6LQ8N4H0 392 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 GALNT6Q8NCL4 622 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 OR1L3Q8NH93 324 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 UHMK1Q8TAS1 419 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 KIAA1143Q96AT1 154 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 CLIP3Q96DZ5 547 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 MED8Q96G25 268 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 UBXN10Q96LJ8 280 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 LRFN5Q96NI6 719 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 PAFAH2Q99487 392 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 DPH7Q9BTV6 452 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 EFHD1Q9BUP0 239 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TXLNGYQ9BZA5 131 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ATG10Q9H0Y0 220 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 VIPAS39Q9H9C1 493 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ABCF3Q9NUQ8 709 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 EURLQ9NYK6 297 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TAC3Q9UHF0 121 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 ZNF180Q9UJW8 692 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 TLK1Q9UKI8 766 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 IKZF3Q9UKT9 509 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 SNX7Q9UNH6 387 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 AP1M2Q9Y6Q5 423 aa6.87□□□□□ -1.31
PDLIM5-215ENST00000511586 MAP1BP46821 2468 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 A0A087X1B8 175 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 IGKV1-8A0A0C4DH67 115 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 LOC101059948A0A1B0GTJ6 334 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 HMX2A2RU54 273 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 POC1B-GALNT4F8VUJ3 575 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 H3BMH7 237 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 K7ENP7 123 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 MEN1O00255 615 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 MAP2K7O14733 419 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ZSCAN9O15535 394 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 EFSO43281 561 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ZNF749O43361 778 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 HCRTR1O43613 425 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SRPX2O60687 465 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CTSVO60911 334 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SASH3O75995 380 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 C2P06681 752 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 LTA4HP09960 611 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC35E2BP0CK96 405 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 NPPBP16860 134 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TCN2P20062 427 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CNTFP26441 200 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TYK2P29597 1187 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 STAT5AP42229 794 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 HNMTP50135 292 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SERPINB8P50452 374 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TBPL1P62380 186 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 RELAQ04206 551 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms