RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ZC3H12BQ5HYM0 836 aaKnown RBP10.17□□□□□ -0.78
SNF8-207ENST00000509995 OR5AR1Q8NGP9 310 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 SLCO2A1Q92959 643 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 TSGA13Q96PP4 275 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 KCNK13Q9HB14 408 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 PNPLA3Q9NST1 481 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 B4GALT7Q9UBV7 327 aa10.17□□□□□ -0.78
SNF8-207ENST00000509995 HOOK1Q9UJC3 728 aaKnown RBP10.17□□□□□ -0.78
SNF8-207ENST00000509995 TUBAL3A6NHL2 446 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 NPIPA2E9PIF3 369 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 NPIPA3F8WFD2 350 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 PDE9AO76083 593 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 C8orf89P0DMQ9 161 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 NID1P14543 1247 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 IL1R2P27930 398 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 VSX2P58304 361 aaPredicted RBP10.16□□□□□ -0.78
SNF8-207ENST00000509995 AP1B1Q10567 949 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 MAMLD1Q13495 774 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 POU4F3Q15319 338 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 PCSK7Q16549 785 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 GXYLT1Q4G148 440 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 ZNF658BQ4V348 819 aaPredicted RBP10.16□□□□□ -0.78
SNF8-207ENST00000509995 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
SNF8-207ENST00000509995 SLC13A5Q86YT5 568 aaPredicted RBP10.16□□□□□ -0.78
SNF8-207ENST00000509995 MCOLN2Q8IZK6 566 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 OR5M9Q8NGP3 310 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 C16orf52Q8NHV5 167 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 HSPH1Q92598 858 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 RNASE6Q93091 150 aaKnown RBP10.16□□□□□ -0.78
SNF8-207ENST00000509995 PIGTQ969N2 578 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 LRRC46Q96FV0 321 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 PERPQ96FX8 193 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 C10orf90Q96M02 699 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 TGIF2Q9GZN2 237 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 NDST4Q9H3R1 872 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 DSCAMO60469 2012 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
SNF8-207ENST00000509995 IGHV3-20A0A0C4DH32 117 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 DNAJB6O75190 326 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 NDST3O95803 873 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 TPBGLP0DKB5 382 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 SOX5P35711 763 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 ASCL1P50553 236 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 NR0B1P51843 470 aaKnown RBP10.15□□□□□ -0.78
SNF8-207ENST00000509995 MESDQ14696 234 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 MUM1Q2TAK8 710 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 FBXL19-AS1Q494R0 122 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 WASHC2DQ5SRD0 308 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 RTL6Q6ICC9 239 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 ZNF585AQ6P3V2 769 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 ZNF227Q86WZ6 799 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 LGI4Q8N135 537 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 SLC5A8Q8N695 610 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 CNTD1Q8N815 330 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 RELL2Q8NC24 303 aaPredicted RBP10.15□□□□□ -0.78
SNF8-207ENST00000509995 OR52N2Q8NGI0 321 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 IMP4Q96G21 291 aaKnown RBP10.15□□□□□ -0.78
SNF8-207ENST00000509995 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 TRIM7Q9C029 511 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 TRABDQ9H4I3 376 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 PCDH18Q9HCL0 1135 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 MKKSQ9NPJ1 570 aaPredicted RBP10.15□□□□□ -0.78
SNF8-207ENST00000509995 CR1P17927 2039 aa10.15□□□□□ -0.78
SNF8-207ENST00000509995 MBD3L4A6NDZ8 208 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 MBD3L5A6NJ08 208 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 BIN1O00499 593 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 CES2O00748 559 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNF8-207ENST00000509995 SRPX2O60687 465 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 TCF4P15884 667 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 PCK1P35558 622 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 PRKCIP41743 596 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 JAM2P57087 298 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 RPA4Q13156 261 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 CHRFAM7AQ494W8 412 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 C10orf62Q5T681 223 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 NCBP2-AS2Q69YL0 99 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 KIAA0930Q6ICG6 404 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 LANCL3Q6ZV70 420 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 CPEB2Q7Z5Q1 589 aaKnown RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 ZC3H7AQ8IWR0 971 aaKnown RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 AMER3Q8N944 861 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 METTL21AQ8WXB1 218 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 ZFYVE21Q9BQ24 234 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 PLA2G12AQ9BZM1 189 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 AMBRA1Q9C0C7 1298 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 GANQ9H2C0 597 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 MMP25Q9NPA2 562 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 LUC7LQ9NQ29 371 aaKnown RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 PARVAQ9NVD7 372 aa10.14□□□□□ -0.79
SNF8-207ENST00000509995 INTS7Q9NVH2 962 aaKnown RBP10.14□□□□□ -0.79
SNF8-207ENST00000509995 STOX2Q9P2F5 926 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms