RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 NR1D2Q14995 579 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 SEPT7Q16181 437 aaKnown RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 FAM83EQ2M2I3 478 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 GPRC6AQ5T6X5 926 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 AGAP9Q5VTM2 703 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 ZNF574Q6ZN55 896 aaPredicted RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 TRAPPC5Q8IUR0 188 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 ZNF547Q8IVP9 402 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 C10orf107Q8IVU9 208 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 SFRP1Q8N474 314 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 FBXO39Q8N4B4 442 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 GBP7Q8N8V2 638 aaPredicted RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 OR6P1Q8NGX9 317 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 WDR36Q8NI36 951 aaKnown RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 HEXDCQ8WVB3 486 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 KCTD4Q8WVF5 259 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 ANKRD49Q8WVL7 239 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 NXNL1Q96CM4 212 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 L3HYPDHQ96EM0 354 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 ZNF578Q96N58 590 aaPredicted RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 NSUN5Q96P11 429 aaKnown RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 VPS35Q96QK1 796 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 ATOH8Q96SQ7 321 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 MECRQ9BV79 373 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 MRPL46Q9H2W6 279 aaKnown RBP7.08□□□□□ -1.28
TRIO-213ENST00000509354 TRIM39Q9HCM9 518 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 PRDM8Q9NQV8 689 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 KLC4Q9NSK0 619 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 XPR1Q9UBH6 696 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 SLC12A4Q9UP95 1085 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 PKP3Q9Y446 797 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 LOXL2Q9Y4K0 774 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 PCDHGA8Q9Y5G5 932 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 USH1CQ9Y6N9 552 aa7.08□□□□□ -1.28
TRIO-213ENST00000509354 FER1L5A0AVI2 2057 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 BAHCC1Q9P281 2608 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 IGHV5-10-1A0A0J9YXX1 117 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 GLYATL1P3A0A0U1RQE8 302 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 H3BMM5 538 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 PRMT5O14744 637 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 CHUKO15111 745 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 RRP8O43159 456 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 DLX3O60479 287 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 NPHS1O60500 1241 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 SMNDC1O75940 238 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIO-213ENST00000509354 CPNE6O95741 557 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 PRSS56P0CW18 603 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 RALBP11234 206 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 F3P13726 295 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ZNF7P17097 686 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 ACRV1P26436 265 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 RBMS1P29558 406 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 FASLGP48023 281 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 KCNC1P48547 511 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 PPM1FP49593 454 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 CDKN1CP49918 316 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 MAPK10P53779 464 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ERVPABLB-1P60509 514 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ATP6V0D1P61421 351 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 NAA20P61599 178 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 UBE2IP63279 158 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 TMPRSS15P98073 1019 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 HHEXQ03014 270 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ZFP36L1Q07352 338 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 BNIP1Q12981 228 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 SRSF6Q13247 344 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 STX3Q13277 289 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ZNF460Q14592 562 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 CHI3L2Q15782 390 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 LIPMQ5VYY2 423 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 NAPRTQ6XQN6 538 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 FAM83HQ6ZRV2 1179 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 FAM47EQ6ZV65 393 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 DET1Q7L5Y6 550 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 TRPM8Q7Z2W7 1104 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 PIWIL4Q7Z3Z4 852 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 C11orf96Q7Z7L8 435 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 LDB1Q86U70 411 aaPredicted RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 LRRTM4Q86VH4 590 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 LSMEM2Q8N112 164 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 NXPE1Q8N323 547 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 FITM2Q8N6M3 262 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 RASGEF1AQ8N9B8 481 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 CCDC63Q8NA47 563 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 GALNT6Q8NCL4 622 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ZNF248Q8NDW4 579 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 GIMAP7Q8NHV1 300 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 PIWIL2Q8TC59 973 aaKnown RBP7.07□□□□□ -1.28
TRIO-213ENST00000509354 CD200R1Q8TD46 325 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 KCNE4Q8WWG9 221 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 EDARADDQ8WWZ3 215 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 KIAA1191Q96A73 305 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 CCDC126Q96EE4 140 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 RNF31Q96EP0 1072 aa7.07□□□□□ -1.28
TRIO-213ENST00000509354 ELMO2Q96JJ3 720 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms