RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PDK3Q15120 406 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 CALCRLQ16602 461 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 GXYLT1Q4G148 440 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 CCDC58Q4VC31 144 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 B3GNT9Q6UX72 402 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SPATA31D4Q6ZUB0 917 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 MOB2Q70IA6 237 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 HIST3H2AQ7L7L0 130 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SLC51BQ86UW2 128 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 NSMAFQ92636 917 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 KAT2BQ92831 832 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SAMD8Q96LT4 415 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SAMD11Q96NU1 681 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 TM6SF2Q9BZW4 377 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 WDR26Q9H7D7 661 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ZMAT4Q9H898 229 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 GLRX2Q9NS18 164 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 PTTG2Q9NZH5 202 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SH3GLB1Q9Y371 365 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ZHX2Q9Y6X8 837 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 TRBV2A0A0J9YWF9 115 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ARVCFO00192 962 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SOCS6O14544 535 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 TOR1AO14656 332 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 RGS16O15492 202 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 LILRA1O75019 489 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF8P17098 575 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SLC8A1P32418 973 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ADRA1BP35368 520 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 STAT6P42226 847 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 WASP42768 502 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 GABRB2P47870 512 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SPIBQ01892 262 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 IL11RAQ14626 422 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 MEP1AQ16819 746 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 BEND6Q5SZJ8 279 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ANGEL2Q5VTE6 544 aaKnown RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ZDHHC20Q5W0Z9 365 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 KRT79Q5XKE5 535 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 FBXO46Q6PJ61 603 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 VITQ6UXI7 678 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ADAMTSL2Q86TH1 951 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SFRP1Q8N474 314 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 TXNDC5Q8NBS9 432 aaKnown RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SLC44A5Q8NCS7 719 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 OR56A3Q8NH54 315 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 OR52J3Q8NH60 311 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 SLC20A1Q8WUM9 679 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ASB5Q8WWX0 329 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 AZIN2Q96A70 460 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 FAM131CQ96AQ9 280 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 DNAJC1Q96KC8 554 aaKnown RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 PRRX2Q99811 253 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 CINPQ9BW66 212 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 TSGA10Q9BZW7 698 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 KLHL31Q9H511 634 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 LTB4R2Q9NPC1 389 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 QPCTLQ9NXS2 382 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.82□□□□□ -1.85e-6■■■■□ 20.5
NEDD4-209ENST00000508871 COL20A1Q9P218 1284 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 PCOLCE2Q9UKZ9 415 aa3.82□□□□□ -1.8
NEDD4-209ENST00000508871 ASTN2O75129 1339 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-209ENST00000508871 BECN2A8MW95 431 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SULT1C2O00338 296 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ICAM1P05362 532 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CSF1P09603 554 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ALADP13716 330 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CREB1P16220 341 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EGR1P18146 543 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PVALBP20472 110 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EPHA3P29320 983 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CAPGP40121 348 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC1A4P43007 532 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RPS18P62269 152 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SNRPFP62306 86 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SMAD3P84022 425 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EXOC3L2Q2M3D2 409 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RFX4Q33E94 735 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FBXO43Q4G163 708 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 LINC00528Q8N1L1 170 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FNDC5Q8NAU1 212 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ENKURQ8TC29 256 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 KCTD4Q8WVF5 259 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RAD54LQ92698 747 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PBKQ96KB5 322 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PRMT6Q96LA8 375 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GAREM1Q9H706 876 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GID8Q9NWU2 228 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 IKZF2Q9UKS7 526 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM184BQ9Y519 407 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SOWAHBA6NEL2 793 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EIF4E1BA6NMX2 242 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GJE1A6NN92 205 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 OPN1LWP04000 364 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 VTNP04004 478 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MBL2P11226 248 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CD68P34810 354 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EVI2BP34910 448 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 THOP1P52888 689 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms