RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 OR2B2Q9GZK3 357 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 ZMYND12Q9H0C1 365 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 CDH20Q9HBT6 801 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 ZNF701Q9NV72 531 aaPredicted RBP4.53□□□□□ -1.68
GYPA-205ENST00000508337 NKIRAS2Q9NYR9 191 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 MAN1B1Q9UKM7 699 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 PPP1R3CQ9UQK1 317 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
GYPA-205ENST00000508337 ATP5BP06576 529 aaKnown RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 GPIP06744 558 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 DPEP1P16444 411 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 AZGP1P25311 298 aaKnown RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 MMP12P39900 470 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 LHX1P48742 406 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 ZNF131P52739 623 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 B3GALT5-AS1P59052 145 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 HERC3Q15034 1050 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 UGT3A2Q3SY77 523 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 GLIPR1L2Q4G1C9 344 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 KLHL26Q53HC5 615 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 DNAJC21Q5F1R6 531 aaKnown RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 SPDYCQ5MJ68 293 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 TMEM207Q6UWW9 146 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 ZNF497Q6ZNH5 498 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 LCA5Q86VQ0 697 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 ZNF614Q8N883 585 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 SMAP2Q8WU79 429 aaPredicted RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 KCNE4Q8WWG9 221 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 PGAP3Q96FM1 320 aaPredicted RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 OTUB1Q96FW1 271 aaPredicted RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 ZNF558Q96NG5 402 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 AGAP3Q96P47 875 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 NKX3-1Q99801 234 aaPredicted RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 TXLNGYQ9BZA5 131 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 XAB2Q9HCS7 855 aaKnown RBP4.52□□□□□ -1.69
GYPA-205ENST00000508337 TXNDC16Q9P2K2 825 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 CHKBQ9Y259 395 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 SNX5Q9Y5X3 404 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 R4GN57 208 aa4.52□□□□□ -1.69
GYPA-205ENST00000508337 A0A0J9YWU9 116 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 GLRA3O75311 464 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 TBX6O95947 436 aaPredicted RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 FYNP06241 537 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 SLC2A2P11168 524 aaPredicted RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 IL11P20809 199 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 HOXC13P31276 330 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 CTNNA1P35221 906 aaKnown RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 PTGER4P35408 488 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 NKX2-1P43699 371 aaPredicted RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 TDO2P48775 406 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 GSDMDP57764 484 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 HNRNPKP61978 463 aaKnown RBP eCLIP4.51□□□□□ -1.69
GYPA-205ENST00000508337 MYL7Q01449 175 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 PPP2R5CQ13362 524 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 FCN2Q15485 313 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 CRY2Q49AN0 593 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 LYSMD4Q5XG99 296 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 PLPPR4Q7Z2D5 763 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 TLK2Q86UE8 772 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 PIGBQ92521 554 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 RMDN1Q96DB5 314 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 FAM71F1Q96KD3 344 aaPredicted RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 CFAP57Q96MR6 1250 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 CPNE1Q99829 537 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 GTPBP2Q9BX10 602 aaKnown RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 XPO4Q9C0E2 1151 aaKnown RBP4.51□□□□□ -1.69
GYPA-205ENST00000508337 ERVMER34-1Q9H9K5 563 aa4.51□□□□□ -1.69
GYPA-205ENST00000508337 A0A1W2PPQ1 181 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 FEZF1A0PJY2 475 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 GTPBP10A4D1E9 387 aaKnown RBP4.5□□□□□ -1.69
GYPA-205ENST00000508337 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.5□□□□□ -1.69
GYPA-205ENST00000508337 CDK2AP2O75956 126 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 DNTTP04053 509 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 CD22P20273 847 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 CETN2P41208 172 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 LUMP51884 338 aaPredicted RBP4.5□□□□□ -1.69
GYPA-205ENST00000508337 RBPJQ06330 500 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 CAMK2DQ13557 499 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 FAAP20Q6NZ36 180 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 FAM198BQ6UWH4 519 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 KRT74Q7RTS7 529 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 PTAR1Q7Z6K3 402 aaPredicted RBP4.5□□□□□ -1.69
GYPA-205ENST00000508337 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 OLIG1Q8TAK6 271 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 MAPK15Q8TD08 544 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 PROX1Q92786 737 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 TSACCQ96A04 125 aaPredicted RBP4.5□□□□□ -1.69
GYPA-205ENST00000508337 ZNF599Q96NL3 588 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 IWS1Q96ST2 819 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 SPHK2Q9NRA0 654 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 DISP3Q9P2K9 1392 aa4.5□□□□□ -1.69
GYPA-205ENST00000508337 NTN3O00634 580 aaPredicted RBP4.49□□□□□ -1.69
GYPA-205ENST00000508337 SNX3O60493 162 aa4.49□□□□□ -1.69
GYPA-205ENST00000508337 SLCO2B1O94956 709 aa4.49□□□□□ -1.69
GYPA-205ENST00000508337 CELF2O95319 508 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms