RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 LRRC73Q5JTD7 316 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 C6orf136Q5SQH8 315 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PLBD1Q6P4A8 553 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 CASC4Q6P4E1 433 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 FIGLAQ6QHK4 219 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PLXDC2Q6UX71 529 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 TLK2Q86UE8 772 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PEX5LQ8IYB4 626 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF440Q8IYI8 595 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 C1orf52Q8N6N3 182 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZFAND2BQ8WV99 257 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 UBLCP1Q8WVY7 318 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 TEKT1Q969V4 418 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 FAM81BQ96LP2 452 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ABHD6Q9BV23 337 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 WNT5BQ9H1J7 359 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PPIL3Q9H2H8 161 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 APOBEC3GQ9HC16 384 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 KLHL9Q9P2J3 617 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 TRPC4Q9UBN4 977 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 POLLQ9UGP5 575 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 HOOK1Q9UJC3 728 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 LEF1Q9UJU2 399 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 CDH7Q9ULB5 785 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 B3GALT5Q9Y2C3 310 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 COL5A2P05997 1499 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ACEP12821 1306 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 A0A087X002 238 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 DUXAA6NLW8 204 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 CCDC188H7C350 402 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 CLDN4O14493 209 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ARHGEF9O43307 516 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZBTB14O43829 449 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 KINO60870 393 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 LIPFP07098 398 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 MSH3P20585 1137 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 PTPN3P26045 913 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 SLC9A3P48764 834 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ST8SIA6P61647 398 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 KCNJ10P78508 379 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 MELKQ14680 651 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 MVPQ14764 893 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 SPOUT1Q5T280 376 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 NDUFAF5Q5TEU4 345 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ENPP7Q6UWV6 458 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 Q75L30 129 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 PHLDB2Q86SQ0 1253 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 P2RY8Q86VZ1 359 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ERC1Q8IUD2 1116 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF595Q8IYB9 648 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF611Q8N823 705 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 SLC38A9Q8NBW4 561 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ANKRD20A12PQ8NF67 263 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF473Q8WTR7 871 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 MTERF3Q96E29 417 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 SPDL1Q96EA4 605 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 RUNDC3BQ96NL0 473 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 OR6C1Q96RD1 312 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 HNRNPABQ99729 332 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 OLFM1Q99784 485 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 SLX1AQ9BQ83 275 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 TNMDQ9H2S6 317 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 FN3KQ9H479 309 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 TMEM206Q9H813 350 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 PRMT7Q9NVM4 692 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 PADI2Q9Y2J8 665 aa3.82□□□□□ -1.8
TRAPPC13-209ENST00000508304 TAF1P21675 1872 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 KRT87PA6NCN2 255 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ANKUB1A6NFN9 424 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 CCDC69A6NI79 296 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 PGRMC2O15173 223 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF217O75362 1048 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 LUC7L3O95232 432 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 SIX3O95343 332 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 PLA2G4BP0C869 781 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 DESP17661 470 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ITIH1P19827 911 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ACAT1P24752 427 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 HRH2P25021 359 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 MAPK3P27361 379 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 WNT5AP41221 380 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 KCNJ1P48048 391 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ASCL1P50553 236 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 NAGLUP54802 743 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 NME5P56597 212 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 BPIFB3P59826 476 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 SPOCK1Q08629 439 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 C17orf67Q0P5P2 114 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 NPRL3Q12980 569 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZC2HC1CQ53FD0 456 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 RNASEH2BQ5TBB1 312 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 ETFRF1Q6IPR1 90 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 FAAP20Q6NZ36 180 aa3.81□□□□□ -1.8
TRAPPC13-209ENST00000508304 TMEM270Q6UE05 265 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms