RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FAM207AQ9NSI2 230 aaPredicted RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 ADPRHL2Q9NX46 363 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 P4HTMQ9NXG6 502 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 DDX43Q9NXZ2 648 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 SCN5AQ14524 2016 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 A0A087WYN8 130 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 EME2A4GXA9 379 aaPredicted RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 SERINC4A6NH21 518 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 C2orf81A6NN90 581 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 SMIM1B2RUZ4 78 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 PRSS44E7EML9 344 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 PPIP5K2O43314 1243 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 MOCS3O95396 460 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 PLGP00747 810 aaPredicted RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 VIMP08670 466 aaKnown RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 CD48P09326 243 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 GP1BBP13224 206 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 DARSP14868 501 aaKnown RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 CA6P23280 308 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 ILF2Q12905 390 aaKnown RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 KRTAP24-1Q3LI83 254 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 SLC35E4Q6ICL7 350 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 OR4A47Q6IF82 309 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 FAM166AQ6J272 317 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 C15orf39Q6ZRI6 1047 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 SLC16A9Q7RTY1 509 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 DCUN1D3Q8IWE4 304 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 NHLRC2Q8NBF2 726 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 UXS1Q8NBZ7 420 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 OR4C3Q8NH37 302 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 FIBINQ8TAL6 211 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 GDAP1Q8TB36 358 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 LRRC8CQ8TDW0 803 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 DNASE1L2Q92874 299 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 RIT1Q92963 219 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 HES6Q96HZ4 224 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 NSL1Q96IY1 281 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 PGLYRP2Q96PD5 576 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 INPP4AQ96PE3 977 aaPredicted RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 PARK7Q99497 189 aaKnown RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 NDNQ99608 321 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 MAP3K3Q99759 626 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 MIS12Q9H081 205 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 C2orf40Q9H1Z8 148 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 MINDY3Q9H8M7 445 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 TRPV4Q9HBA0 871 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 ECHDC1Q9NTX5 307 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 INTS9Q9NV88 658 aaKnown RBP3.11□□□□□ -1.91
LSM6-205ENST00000507449 ERAP1Q9NZ08 941 aa3.11□□□□□ -1.91
LSM6-205ENST00000507449 A0A0U1RQK1 487 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 A0A1W2PPW3 197 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ZNF320A2RRD8 509 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 C2CD4DB7Z1M9 353 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 IFIT3O14879 490 aaKnown RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 FLRT2O43155 660 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 SNX3O60493 162 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 NME6O75414 186 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 RPS6KA5O75582 802 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ZNF432O94892 652 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 PGLSO95336 258 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 APOHP02749 345 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 SERPING1P05155 500 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD34CP0C6C1 535 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ITGA3P26006 1051 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ALDH1B1P30837 517 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 DUTP33316 252 aaKnown RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 TCF7P36402 384 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 CDX1P47902 265 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 PHEXP78562 749 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 KLC1Q07866 573 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 SLMAPQ14BN4 828 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 EXT1Q16394 746 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 PHKG1Q16816 387 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 GPR33Q49SQ1 333 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 SLC35D3Q5M8T2 416 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 FAM53AQ6NSI3 398 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 PRSS55Q6UWB4 352 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 CEACAM20Q6UY09 585 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 MSANTD1Q6ZTZ1 278 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 APLFQ8IW19 511 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 ATAD1Q8NBU5 361 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 DBF4BQ8NFT6 615 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 OR10V1Q8NGI7 309 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 OR2T11Q8NH01 316 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 HPSE2Q8WWQ2 592 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 TMEM143Q96AN5 459 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 PYCR2Q96C36 320 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ZNF501Q96CX3 271 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 UHRF2Q96PU4 802 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ZMYND12Q9H0C1 365 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 THAP2Q9H0W7 228 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 CPVLQ9H3G5 476 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 COPS7BQ9H9Q2 264 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 SLC52A3Q9NQ40 469 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ZNF71Q9NQZ8 489 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 FLRT3Q9NZU0 649 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 CDH7Q9ULB5 785 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 ICAM5Q9UMF0 924 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms