RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SNRNP200O75643 2136 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CCNDBP1O95273 360 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 PROCP04070 461 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 S100BP04271 92 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 MYZAPP0CAP1 466 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 PVRP15151 417 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 MAGP20916 626 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CMPK1P30085 196 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CSTF2P33240 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 GDF5P43026 501 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 GABRA4P48169 554 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 HSPA7P48741 367 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SEPHS1P49903 392 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 TSTA3Q13630 321 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SETDB1Q15047 1291 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CCDC153Q494R4 210 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 FIGLAQ6QHK4 219 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 RAB11FIP2Q7L804 512 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 THOC6Q86W42 341 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 FBXO39Q8N4B4 442 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 C19orf47Q8N9M1 422 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 AGBL5Q8NDL9 886 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ZBTB9Q96C00 473 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 PRR11Q96HE9 360 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 HAUS8Q9BT25 410 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SCNM1Q9BWG6 230 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CD244Q9BZW8 370 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CNOT10Q9H9A5 744 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SSU72Q9NP77 194 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SLC6A20Q9NP91 592 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SIDT1Q9NXL6 827 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 WWOXQ9NZC7 414 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ANKMY1Q9P2S6 941 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SH2B3Q9UQQ2 575 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 SLC22A14Q9Y267 594 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ASB1Q9Y576 335 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 ACTL7BQ9Y614 415 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 OR2A25A4D2G3 310 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 B4E171 279 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 G3V2L1 256 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 STX16O14662 325 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PLIN3O60664 434 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PRAMEF10O60809 474 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 STK16O75716 305 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 SASH3O75995 380 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 MSL3P1P0C860 447 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 FGF3P11487 239 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-210ENST00000506767 GFAPP14136 432 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 HRH2P25021 359 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 TSPAN7P41732 249 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 AGTR2P50052 363 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 NFKB2Q00653 900 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 NAA25Q14CX7 972 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PCBP2Q15366 365 aaKnown RBP eCLIP12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PFKFB4Q16877 469 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 FBXO48Q5FWF7 155 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 THEMIS2Q5TEJ8 643 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 METTL2BQ6P1Q9 378 aaKnown RBP12.35□□□□□ -0.43
TCOF1-210ENST00000506767 ESAMQ96AP7 390 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 TCTN2Q96GX1 697 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 SMC6Q96SB8 1091 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 RUFY1Q96T51 708 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 DPH7Q9BTV6 452 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 KLHL25Q9H0H3 589 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 C12orf65Q9H3J6 166 aaKnown RBP12.35□□□□□ -0.43
TCOF1-210ENST00000506767 CENPHQ9H3R5 247 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 FAM60AQ9NP50 221 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 OCIAD1Q9NX40 245 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 KLHL20Q9Y2M5 609 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PLLPQ9Y342 182 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PCDHGA8Q9Y5G5 932 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 CACNA1BQ00975 2339 aa12.35□□□□□ -0.43
TCOF1-210ENST00000506767 PMS2P1A4D2B8 440 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 EFCAB7A8K855 629 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 A8MT66 165 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PLD2O14939 933 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 DLX3O60479 287 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SMIM24O75264 130 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SPAG7O75391 227 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 WDR47O94967 919 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 CCL4P13236 92 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 FOLR1P15328 257 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 ATP5F1P24539 256 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SH3BP2P78314 561 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SHC2P98077 582 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 MC2RQ01718 297 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms